Detailed information NTG0069605

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: UNDKW_RS04270
• Genome accession: NZ_AP018439
• Coordinates: 946103..947557 (+)
• Length: 484 a.a.
• NCBI ID: WP_304941456.1
• Uniprot ID: A0A6N4T0E8
• Organism: Undibacterium sp. KW1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 941103..952557

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UNDKW_RS04250 (UNDKW_0854)	-	941837..943195 (+)	1359	WP_370529083.1	sigma-54-dependent transcriptional regulator	-
UNDKW_RS04255 (UNDKW_0855)	-	943265..944074 (+)	810	WP_162039905.1	inner membrane protein YpjD	-
UNDKW_RS04260 (UNDKW_0856)	-	944071..944322 (+)	252	WP_162057712.1	PP0621 family protein	-
UNDKW_RS04265 (UNDKW_0857)	-	944346..946106 (+)	1761	WP_162057713.1	PAS domain-containing sensor histidine kinase	-
UNDKW_RS04270 (UNDKW_0858)	pilR	946103..947557 (+)	1455	WP_304941456.1	sigma-54 dependent transcriptional regulator	Regulator
UNDKW_RS04275 (UNDKW_0859)	-	948349..951264 (+)	2916	WP_162057714.1	ribonucleoside-diphosphate reductase subunit alpha	-
UNDKW_RS04280 (UNDKW_0860)	-	951344..952513 (+)	1170	WP_162057715.1	ribonucleotide-diphosphate reductase subunit beta	-

Sequence

Protein

• Length: 484 a.a.
• Molecular weight: 53267.31 Da
• Isoelectric Point: 5.0870

>NTDB_id=69605 UNDKW_RS04270 WP_304941456.1 946103..947557(+) (pilR) [Undibacterium sp. KW1]
MSMMEAAACPRILVVDDEAHLRELLEITLIKMGLDVDSAETLALARAHLSKRSYALVLTDMRLPDGSGMELVQEVNSLYK
STPIAVITAFGSADNAVVALKAGAFDYVSKPVALDQLRKLVRSALQTNEVQKVQLATPEKLNVPANSFMIGQSQGMQEVR
AQISRLARSMAPVIITGESGSGKELAAREIHSSSARADKPFIAVNCGAIPETLMEAEFFGYRKGAFTGAADDRDGFFQAA
NGGTLMLDEVADLPLPMQVKLLRAIQERRVRKVGATVEEAVDVRIISATHQNLAICVEEGRFRQDLYYRLNVIELHLPPL
RERLEDIVELSRNILKKLTGNDVDMSVEAIDALISYDFPGNVRELENILERAVAFANDGCIEVSDLALRGTRKLPELPIA
QPVPTAVVNNHSDIVPELPAVTALDVFSAPSLPCSLPDYLESVEREMIRRALQQTRNNRTQAAELLGVSFRQLRYQIQKL
KIQE

Nucleotide

• Length: 1455 bp

>NTDB_id=69605 UNDKW_RS04270 WP_304941456.1 946103..947557(+) (pilR) [Undibacterium sp. KW1]
ATGAGTATGATGGAAGCTGCGGCCTGTCCCCGCATCCTGGTAGTGGATGATGAGGCGCACCTGCGTGAGTTGCTGGAGAT
TACCCTGATCAAAATGGGGCTGGATGTCGATAGCGCAGAAACCCTGGCACTGGCCCGCGCTCACCTGAGCAAGCGTAGCT
ATGCACTGGTACTGACCGATATGCGTCTGCCTGACGGATCGGGCATGGAACTGGTACAGGAGGTAAATAGCCTCTATAAG
AGCACACCTATTGCCGTGATCACCGCTTTTGGCAGTGCTGACAATGCCGTGGTTGCCTTGAAGGCCGGTGCTTTCGACTA
TGTTTCCAAGCCAGTGGCGCTTGACCAGTTGCGCAAGCTCGTCAGGTCGGCCCTGCAAACCAATGAGGTTCAAAAAGTAC
AACTGGCGACTCCGGAAAAACTGAATGTCCCCGCCAATTCTTTCATGATAGGCCAGTCGCAAGGCATGCAAGAGGTCAGG
GCGCAGATCAGCCGCCTTGCACGCAGCATGGCACCGGTCATTATTACTGGCGAATCTGGTAGCGGCAAGGAGTTGGCGGC
GCGCGAAATACACAGCAGCAGCGCCAGGGCCGACAAGCCTTTTATCGCCGTCAATTGCGGGGCAATTCCCGAGACCTTGA
TGGAAGCTGAATTCTTTGGTTACAGAAAAGGTGCATTTACTGGTGCCGCTGATGACAGGGATGGTTTTTTTCAGGCTGCC
AACGGTGGCACCCTGATGCTTGATGAAGTGGCTGACCTGCCTTTGCCCATGCAAGTCAAGTTACTGCGTGCCATACAGGA
AAGGCGCGTGCGCAAGGTTGGTGCCACGGTCGAAGAGGCAGTTGATGTGCGCATTATCAGTGCGACCCACCAGAACCTGG
CGATCTGTGTAGAAGAGGGGCGCTTCCGGCAAGACCTGTATTACCGCCTGAATGTCATTGAATTGCACTTGCCACCTCTG
CGCGAAAGACTGGAGGATATAGTCGAGCTGTCGCGCAATATCCTCAAGAAACTGACAGGTAATGATGTTGATATGTCAGT
AGAGGCAATTGACGCGTTGATCAGTTATGACTTTCCCGGCAATGTGCGTGAGCTGGAAAACATATTGGAGCGTGCAGTTG
CCTTTGCCAATGATGGCTGCATAGAGGTTAGCGACCTGGCCTTGCGCGGAACCAGGAAGTTGCCTGAACTGCCGATAGCA
CAGCCCGTCCCGACCGCTGTTGTCAATAATCATAGCGATATTGTTCCTGAATTACCCGCTGTTACCGCGCTGGATGTATT
CTCTGCTCCAAGTTTGCCTTGCTCGCTGCCCGACTATCTCGAAAGCGTAGAGCGCGAAATGATACGCCGTGCCCTGCAGC
AGACCCGTAACAACCGTACCCAGGCGGCAGAATTGCTGGGCGTCAGTTTCCGTCAACTGCGTTACCAGATACAAAAACTG
AAGATCCAGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (440-480)

• Response regulator receiver domain (Response_reg) (12-121)

• Sigma-54 interaction domain (Sigma54_activat) (149-315)

3D structure

• AlphaFold DB: A0A6N4T0E8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	51.891	98.347	0.51
pilR	Acinetobacter baumannii strain A118	44.583	99.174	0.442