Detailed information NTG0695414

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NCL52_RS18890
• Genome accession: NZ_CP098417
• Coordinates: 3679458..3680603 (+)
• Length: 381 a.a.
• NCBI ID: WP_086344441.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain N2-10
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3674458..3685603

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NCL52_RS18870 (NCL52_18870)	albF	3674473..3675753 (+)	1281	WP_086344438.1	pitrilysin family protein	-
NCL52_RS18875 (NCL52_18875)	albG	3675750..3676451 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NCL52_RS18880 (NCL52_18880)	ywhL	3676457..3677833 (-)	1377	WP_086344439.1	YncE family protein	-
NCL52_RS18885 (NCL52_18885)	ywhK	3677873..3679228 (-)	1356	WP_086344440.1	YncE family protein	-
NCL52_RS20800	-	3679225..3679455 (-)	231	WP_024572000.1	hypothetical protein	-
NCL52_RS18890 (NCL52_18890)	rapF	3679458..3680603 (+)	1146	WP_086344441.1	response regulator aspartate phosphatase RapF	Regulator
NCL52_RS18895 (NCL52_18895)	phrF	3680587..3680706 (+)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
NCL52_RS18900 (NCL52_18900)	-	3680804..3681266 (+)	463	Protein_3674	YbaK/EbsC family protein	-
NCL52_RS18905 (NCL52_18905)	speB	3681298..3682170 (-)	873	WP_003227545.1	agmatinase	-
NCL52_RS18910 (NCL52_18910)	speE	3682231..3683061 (-)	831	WP_003227543.1	spermidine synthase	-
NCL52_RS18915 (NCL52_18915)	pbpG	3683263..3685338 (+)	2076	WP_015384942.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45631.11 Da
• Isoelectric Point: 5.1503

>NTDB_id=695414 NCL52_RS18890 WP_086344441.1 3679458..3680603(+) (rapF) [Bacillus subtilis strain N2-10]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=695414 NCL52_RS18890 WP_086344441.1 3679458..3680603(+) (rapF) [Bacillus subtilis strain N2-10]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAAGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572