Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NAF01_RS07170 Genome accession   NZ_CP098323
Coordinates   1368233..1368421 (+) Length   62 a.a.
NCBI ID   WP_197245493.1    Uniprot ID   -
Organism   Cytobacillus firmus strain PheN7     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1363233..1373421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NAF01_RS07150 (NAF01_07150) - 1365121..1365312 (-) 192 WP_048010975.1 DUF2929 family protein -
  NAF01_RS07155 (NAF01_07155) - 1365494..1366231 (+) 738 WP_048010974.1 alpha/beta hydrolase -
  NAF01_RS07160 (NAF01_07160) - 1366310..1367137 (+) 828 WP_250802021.1 hypothetical protein -
  NAF01_RS07165 (NAF01_07165) med 1367247..1368203 (+) 957 WP_048010972.1 BMP family ABC transporter substrate-binding protein Regulator
  NAF01_RS07170 (NAF01_07170) comZ 1368233..1368421 (+) 189 WP_197245493.1 ComZ family protein Regulator
  NAF01_RS07175 (NAF01_07175) - 1368477..1368863 (-) 387 WP_250802022.1 hypothetical protein -
  NAF01_RS07180 (NAF01_07180) - 1369079..1370011 (+) 933 WP_250802023.1 beta-ketoacyl-ACP synthase III -
  NAF01_RS07185 (NAF01_07185) fabF 1370309..1371547 (+) 1239 WP_250802024.1 beta-ketoacyl-ACP synthase II -
  NAF01_RS07190 (NAF01_07190) - 1371786..1372451 (+) 666 WP_053071383.1 DUF2268 domain-containing putative Zn-dependent protease -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7256.38 Da        Isoelectric Point: 3.9646

>NTDB_id=694897 NAF01_RS07170 WP_197245493.1 1368233..1368421(+) (comZ) [Cytobacillus firmus strain PheN7]
MNEKNMEFMQIAMKYLPEAKQQLDEAGIELSMEMIQPFMNLFTKVMNEAYEMGKTDALNESE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=694897 NAF01_RS07170 WP_197245493.1 1368233..1368421(+) (comZ) [Cytobacillus firmus strain PheN7]
ATGAACGAAAAAAACATGGAATTCATGCAAATCGCAATGAAATACTTGCCAGAAGCCAAACAGCAGCTTGACGAAGCTGG
CATCGAACTATCTATGGAAATGATCCAGCCATTCATGAACCTATTCACCAAAGTCATGAACGAAGCCTATGAAATGGGCA
AAACGGATGCTTTGAATGAGAGTGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

73.77

98.387

0.726