Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NAF01_RS07165 Genome accession   NZ_CP098323
Coordinates   1367247..1368203 (+) Length   318 a.a.
NCBI ID   WP_048010972.1    Uniprot ID   A0AA46SKU2
Organism   Cytobacillus firmus strain PheN7     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1362247..1373203
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NAF01_RS07145 (NAF01_07145) clpB 1362454..1365051 (+) 2598 WP_250802020.1 ATP-dependent chaperone ClpB -
  NAF01_RS07150 (NAF01_07150) - 1365121..1365312 (-) 192 WP_048010975.1 DUF2929 family protein -
  NAF01_RS07155 (NAF01_07155) - 1365494..1366231 (+) 738 WP_048010974.1 alpha/beta hydrolase -
  NAF01_RS07160 (NAF01_07160) - 1366310..1367137 (+) 828 WP_250802021.1 hypothetical protein -
  NAF01_RS07165 (NAF01_07165) med 1367247..1368203 (+) 957 WP_048010972.1 BMP family ABC transporter substrate-binding protein Regulator
  NAF01_RS07170 (NAF01_07170) comZ 1368233..1368421 (+) 189 WP_197245493.1 ComZ family protein Regulator
  NAF01_RS07175 (NAF01_07175) - 1368477..1368863 (-) 387 WP_250802022.1 hypothetical protein -
  NAF01_RS07180 (NAF01_07180) - 1369079..1370011 (+) 933 WP_250802023.1 beta-ketoacyl-ACP synthase III -
  NAF01_RS07185 (NAF01_07185) fabF 1370309..1371547 (+) 1239 WP_250802024.1 beta-ketoacyl-ACP synthase II -
  NAF01_RS07190 (NAF01_07190) - 1371786..1372451 (+) 666 WP_053071383.1 DUF2268 domain-containing putative Zn-dependent protease -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 35572.16 Da        Isoelectric Point: 4.4144

>NTDB_id=694896 NAF01_RS07165 WP_048010972.1 1367247..1368203(+) (med) [Cytobacillus firmus strain PheN7]
MHKTLKKLGILLLCLLLLASCRQPMSAGKLEKAGLLVPDTVNDQVWGTKGYKGMLKIQSHYDIEVYYKEGMNSEMVVERA
VKEFDQKGVNLIFGHGNEYAAYFNNISKKYPDIHFVSFNGDAQNENTTSLNFEAYAMGFFGGMVAGHMTKTNNVGILAAF
EWQPEVEGFYEGANYINDNVNVQIQYVGNWDNDNKAIALLDKLIANKTDVVYPAGDGYNVPVIEKLKEEGLYAIGYISDQ
SDLGESVVLTSTIQHVDVLYELVAEKYNEGELESGNLSFDFEDEVISLGKFSPDVDEEFKKELNAVIENYKKTGKLPE

Nucleotide


Download         Length: 957 bp        

>NTDB_id=694896 NAF01_RS07165 WP_048010972.1 1367247..1368203(+) (med) [Cytobacillus firmus strain PheN7]
ATGCATAAGACATTAAAGAAATTAGGGATCCTTCTTTTGTGCCTTCTTTTATTGGCCTCCTGCAGACAGCCGATGTCTGC
AGGAAAACTTGAGAAAGCTGGATTATTAGTGCCCGATACTGTCAATGACCAAGTATGGGGGACCAAAGGCTATAAAGGCA
TGCTAAAGATTCAATCCCATTATGATATTGAGGTTTATTATAAAGAAGGAATGAATTCAGAGATGGTTGTTGAAAGAGCA
GTTAAAGAGTTTGACCAAAAAGGTGTAAACCTGATCTTTGGACATGGCAATGAATACGCTGCATACTTTAATAACATCTC
AAAAAAATATCCTGACATTCACTTTGTCAGCTTTAATGGTGACGCCCAAAATGAAAACACCACCAGTTTGAACTTTGAAG
CATATGCCATGGGTTTCTTCGGAGGCATGGTTGCAGGACATATGACGAAAACGAATAATGTAGGAATACTGGCGGCTTTT
GAATGGCAGCCGGAAGTAGAAGGTTTTTATGAAGGTGCAAACTATATCAATGATAATGTAAACGTGCAGATCCAATATGT
CGGCAACTGGGACAATGATAACAAAGCCATCGCTCTTTTGGACAAACTTATTGCCAATAAGACAGATGTTGTATATCCGG
CCGGAGATGGGTATAATGTTCCTGTTATCGAAAAGCTGAAAGAAGAAGGGCTCTACGCCATCGGATATATTTCCGATCAG
TCTGATTTGGGTGAATCAGTCGTCCTGACCAGTACAATTCAGCATGTAGATGTTTTATATGAACTAGTGGCAGAAAAATA
TAACGAAGGCGAGCTTGAATCAGGAAATCTATCCTTCGATTTCGAGGATGAAGTGATTTCACTTGGGAAATTCAGCCCTG
ACGTTGACGAAGAATTCAAAAAAGAACTAAACGCTGTCATTGAGAATTACAAAAAAACAGGCAAATTGCCTGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

52.229

98.742

0.516