Detailed information NTG0069481

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BVS141_RS02015
• Genome accession: NZ_AP018402
• Coordinates: 399952..401100 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain S141
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 394952..406100

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVS141_RS01995 (BVS141_04010)	-	395349..396032 (-)	684	WP_060563076.1	ABC transporter ATP-binding protein	-
BVS141_RS02000 (BVS141_04020)	-	396047..397483 (-)	1437	WP_060563077.1	ABC transporter permease	-
BVS141_RS02005 (BVS141_04030)	-	397696..398379 (+)	684	WP_060563078.1	response regulator transcription factor	-
BVS141_RS02010 (BVS141_04040)	-	398366..399799 (+)	1434	WP_162262652.1	sensor histidine kinase	-
BVS141_RS02015 (BVS141_04050)	rapC	399952..401100 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
BVS141_RS02020	phrC	401084..401203 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
BVS141_RS02025	-	401354..401464 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
BVS141_RS02030 (BVS141_04060)	-	401544..402908 (-)	1365	WP_060563080.1	aspartate kinase	-
BVS141_RS02040 (BVS141_04070)	ceuB	403324..404277 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
BVS141_RS02045 (BVS141_04080)	-	404267..405214 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
BVS141_RS02050 (BVS141_04090)	-	405208..405966 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=69481 BVS141_RS02015 WP_003156336.1 399952..401100(+) (rapC) [Bacillus velezensis strain S141]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=69481 BVS141_RS02015 WP_003156336.1 399952..401100(+) (rapC) [Bacillus velezensis strain S141]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATATCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568