Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   BVS141_RS01825 Genome accession   NZ_AP018402
Coordinates   341672..342070 (-) Length   132 a.a.
NCBI ID   WP_060563061.1    Uniprot ID   -
Organism   Bacillus velezensis strain S141     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 336672..347070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVS141_RS01800 (BVS141_03630) - 336843..338045 (+) 1203 WP_060563058.1 GTP-binding protein -
  BVS141_RS01805 (BVS141_03640) - 338110..339246 (+) 1137 WP_052827030.1 zinc-dependent alcohol dehydrogenase -
  BVS141_RS01810 (BVS141_03650) - 339261..339695 (+) 435 WP_007409358.1 RDD family protein -
  BVS141_RS01815 (BVS141_03660) - 339767..340090 (+) 324 WP_060563059.1 YckD family protein -
  BVS141_RS01820 (BVS141_03670) - 340195..341631 (+) 1437 WP_060563060.1 glycoside hydrolase family 1 protein -
  BVS141_RS01825 (BVS141_03680) nin/comJ 341672..342070 (-) 399 WP_060563061.1 competence protein ComJ Regulator
  BVS141_RS01830 (BVS141_03690) nucA/comI 342091..342528 (-) 438 WP_060563062.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  BVS141_RS01835 (BVS141_03700) hxlB 342887..343444 (-) 558 WP_007409354.1 6-phospho-3-hexuloisomerase -
  BVS141_RS01840 (BVS141_03710) hxlA 343441..344076 (-) 636 WP_060563063.1 3-hexulose-6-phosphate synthase -
  BVS141_RS01845 (BVS141_03720) - 344308..344670 (+) 363 WP_007409352.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14894.84 Da        Isoelectric Point: 4.7846

>NTDB_id=69479 BVS141_RS01825 WP_060563061.1 341672..342070(-) (nin/comJ) [Bacillus velezensis strain S141]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLSFNIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=69479 BVS141_RS01825 WP_060563061.1 341672..342070(-) (nin/comJ) [Bacillus velezensis strain S141]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTCTTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758

Multiple sequence alignment