Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SR187_RS09830 Genome accession   NZ_AP018400
Coordinates   2089444..2090241 (+) Length   265 a.a.
NCBI ID   WP_120172443.1    Uniprot ID   A0A2Z5TR49
Organism   Streptococcus ruminantium strain GUT-187     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2084444..2095241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SR187_RS09815 (SR187_10130) - 2086828..2087512 (-) 685 Protein_1875 YoaK family protein -
  SR187_RS09820 (SR187_10135) rlmH 2087537..2088016 (-) 480 WP_024531474.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SR187_RS09825 (SR187_10140) htrA 2088208..2089383 (+) 1176 WP_120172442.1 S1C family serine protease Regulator
  SR187_RS09830 (SR187_10145) spo0J 2089444..2090241 (+) 798 WP_120172443.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 265 a.a.        Molecular weight: 30551.09 Da        Isoelectric Point: 9.6999

>NTDB_id=69469 SR187_RS09830 WP_120172443.1 2089444..2090241(+) (spo0J) [Streptococcus ruminantium strain GUT-187]
MEELRTLNISEIHPNPYQPRVHFDEIKLAELAQSIRENGLIQPIIVRKSSVIGYELLAGERRLRASQLAGLTEIPAVVKD
LTDDDLLRQAIIENLQRSDLNPIEEAQSYNNLINKGLTHDKIAQIMGKSRPYVSNILRLLNLSTQTKKAVEEGKISQGHA
RQLLSLSEEKQAEWIQIILEKDLSVHALEKVLSNKKKKQVRQNNPFLKEQEVIISQHLGTTTKILQKKNGKGEIRIHFDN
LDEFERIINSLKYCRAHRFWFNDSR

Nucleotide


Download         Length: 798 bp        

>NTDB_id=69469 SR187_RS09830 WP_120172443.1 2089444..2090241(+) (spo0J) [Streptococcus ruminantium strain GUT-187]
ATGGAAGAATTACGTACCCTAAATATTTCAGAGATACATCCAAATCCCTATCAACCAAGAGTTCATTTTGATGAAATCAA
ACTGGCTGAATTAGCGCAATCTATCAGAGAAAATGGATTGATTCAACCGATTATTGTAAGAAAATCGTCCGTTATTGGAT
ACGAATTATTGGCTGGAGAAAGAAGATTACGCGCCAGTCAATTAGCTGGTCTAACTGAAATACCGGCCGTTGTAAAAGAT
TTAACTGATGATGATTTACTCCGTCAGGCAATTATAGAAAACCTACAACGCTCAGATTTAAATCCTATTGAAGAGGCGCA
ATCTTATAATAATTTGATAAATAAAGGATTGACACATGATAAAATTGCCCAAATTATGGGAAAATCAAGACCTTATGTCA
GTAATATATTGCGACTCTTAAACTTATCCACTCAAACAAAAAAAGCTGTAGAAGAAGGAAAAATTTCACAGGGGCACGCG
CGACAATTGCTCTCACTTTCCGAGGAAAAACAAGCTGAATGGATTCAAATCATTTTAGAAAAAGATTTAAGTGTGCACGC
GCTTGAAAAAGTATTGTCCAATAAAAAGAAGAAACAAGTTAGACAGAACAATCCATTTTTAAAAGAACAAGAGGTCATTA
TTAGCCAGCATCTTGGAACAACTACAAAAATTCTCCAGAAAAAAAATGGGAAAGGGGAGATTCGGATTCATTTTGATAAT
CTAGATGAATTTGAAAGAATTATCAACAGTTTAAAATACTGTCGGGCGCACAGATTTTGGTTTAACGACTCCAGGTGA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-94)

HTH domain found in ParB protein (HTH_ParB)

(146-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2Z5TR49

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

53.755

95.472

0.513

Multiple sequence alignment