Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | SR187_RS08730 | Genome accession | NZ_AP018400 |
| Coordinates | 1847792..1850242 (-) | Length | 816 a.a. |
| NCBI ID | WP_120172274.1 | Uniprot ID | A0A2Z5U5C0 |
| Organism | Streptococcus ruminantium strain GUT-187 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1842792..1855242
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SR187_RS08715 (SR187_8980) | hslO | 1844832..1845698 (+) | 867 | WP_120172269.1 | Hsp33 family molecular chaperone HslO | - |
| SR187_RS08720 (SR187_8985) | dusB | 1845691..1846698 (+) | 1008 | WP_120172272.1 | tRNA dihydrouridine synthase DusB | - |
| SR187_RS08725 (SR187_8995) | - | 1846979..1847473 (-) | 495 | WP_024531807.1 | adenylyltransferase/cytidyltransferase family protein | - |
| SR187_RS08730 (SR187_9000) | clpC | 1847792..1850242 (-) | 2451 | WP_120172274.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| SR187_RS08735 (SR187_9005) | - | 1850248..1850706 (-) | 459 | WP_024531809.1 | CtsR family transcriptional regulator | - |
| SR187_RS08740 (SR187_9010) | - | 1850849..1851187 (+) | 339 | WP_024531810.1 | thioredoxin domain-containing protein | - |
| SR187_RS08745 (SR187_9015) | - | 1851187..1851888 (+) | 702 | WP_120172275.1 | GNAT family acetyltransferase | - |
| SR187_RS08750 (SR187_9020) | tsf | 1852044..1853084 (-) | 1041 | WP_024531812.1 | translation elongation factor Ts | - |
| SR187_RS08755 (SR187_9025) | rpsB | 1853388..1854164 (-) | 777 | WP_120172277.1 | 30S ribosomal protein S2 | - |
| SR187_RS08765 (SR187_9040) | nusG | 1854619..1855158 (-) | 540 | WP_024531814.1 | transcription termination/antitermination protein NusG | - |
Sequence
Protein
Download Length: 816 a.a. Molecular weight: 90629.37 Da Isoelectric Point: 7.0626
>NTDB_id=69465 SR187_RS08730 WP_120172274.1 1847792..1850242(-) (clpC) [Streptococcus ruminantium strain GUT-187]
MKTSIGLRQALEDAQLVAHRYACDYLETWHLLLSFVFNHNTVAGAVLAEYPVSVSDYEHATFVVTGKVYREELKPLRILP
LSKRLDETTSLAKKIAEVLKAKQFGTEHLFMAMLLDKRSTASQILDKVGFHFEDSDDKIRFLDLRKNLEARAGFSKEDLK
AIRSVMKGRKARPANVGQMMGMPPTPQSGGLEDYTRDLTALARDGKIEPVIGRDAELSRMIQILSRKTKNNPVLVGEAGV
GKTALALGLAQRVADGDVPTSLLDMRVLELDLMSVIAGTRFRGDFEERMNNIVNDIEEDGKVILFIDELHTIMGSGSGID
STLDAANILKPALARGTLRTVGATTQGEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHKVRIGEDTV
RVAVSYAKRYLTSKNLPDSAIDLLDEASATVQNRIKGQSTETGLTSLDKALMARKYKTVSKLLLKMREEDETSEVYDLEV
TEEDILETLSRLSGIPVAKLSQSETKKYLSLEEELHKRVIGQDAAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGK
TELAKALAQVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGALDLSRSHEHVEKRIFEELKKAYRPEFINRIDEKVVF
HSLTESHMQDVVKVMVQPLIAVVADKGIRLKLQPSALKLLAKEGYDPEMGARPLRRLLQTKLEDPLAEMLLRGELPTGLT
LKVGVKGAQIRFDIVN
MKTSIGLRQALEDAQLVAHRYACDYLETWHLLLSFVFNHNTVAGAVLAEYPVSVSDYEHATFVVTGKVYREELKPLRILP
LSKRLDETTSLAKKIAEVLKAKQFGTEHLFMAMLLDKRSTASQILDKVGFHFEDSDDKIRFLDLRKNLEARAGFSKEDLK
AIRSVMKGRKARPANVGQMMGMPPTPQSGGLEDYTRDLTALARDGKIEPVIGRDAELSRMIQILSRKTKNNPVLVGEAGV
GKTALALGLAQRVADGDVPTSLLDMRVLELDLMSVIAGTRFRGDFEERMNNIVNDIEEDGKVILFIDELHTIMGSGSGID
STLDAANILKPALARGTLRTVGATTQGEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHKVRIGEDTV
RVAVSYAKRYLTSKNLPDSAIDLLDEASATVQNRIKGQSTETGLTSLDKALMARKYKTVSKLLLKMREEDETSEVYDLEV
TEEDILETLSRLSGIPVAKLSQSETKKYLSLEEELHKRVIGQDAAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGK
TELAKALAQVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGALDLSRSHEHVEKRIFEELKKAYRPEFINRIDEKVVF
HSLTESHMQDVVKVMVQPLIAVVADKGIRLKLQPSALKLLAKEGYDPEMGARPLRRLLQTKLEDPLAEMLLRGELPTGLT
LKVGVKGAQIRFDIVN
Nucleotide
Download Length: 2451 bp
>NTDB_id=69465 SR187_RS08730 WP_120172274.1 1847792..1850242(-) (clpC) [Streptococcus ruminantium strain GUT-187]
ATGAAGACTTCAATTGGTTTGCGACAGGCGCTGGAAGATGCACAGTTGGTAGCCCATCGTTATGCTTGTGATTATTTGGA
AACTTGGCATCTACTCTTGTCTTTCGTGTTTAATCATAATACGGTGGCAGGAGCTGTTCTAGCAGAGTATCCAGTTTCTG
TTTCAGACTATGAACATGCTACTTTTGTAGTGACAGGTAAGGTGTACCGTGAGGAGTTGAAGCCTCTTCGCATTTTACCA
TTGTCTAAGCGTTTGGATGAAACAACTAGTTTGGCTAAGAAGATTGCCGAAGTGCTCAAGGCCAAACAGTTTGGTACGGA
ACATCTTTTTATGGCCATGCTATTGGACAAGCGTTCCACAGCTAGTCAGATTTTAGATAAGGTTGGCTTTCATTTTGAGG
ACTCAGATGATAAGATTCGCTTTCTGGATTTACGTAAAAATTTAGAAGCTCGTGCAGGATTCTCCAAGGAAGATTTAAAA
GCCATCCGTAGTGTTATGAAGGGGAGAAAGGCTAGACCAGCTAATGTGGGGCAAATGATGGGAATGCCTCCTACTCCTCA
AAGTGGTGGTCTTGAGGACTATACTCGGGATTTGACAGCTTTGGCTCGTGATGGCAAGATAGAGCCTGTCATCGGTCGGG
ATGCGGAACTTTCTCGAATGATTCAAATCCTGTCTCGTAAAACGAAGAATAACCCTGTCTTGGTTGGGGAGGCTGGTGTA
GGAAAAACAGCTCTTGCTCTTGGTCTTGCTCAACGTGTAGCAGATGGTGACGTGCCTACTAGTCTGCTTGATATGCGCGT
CTTGGAGTTGGATTTGATGAGTGTCATCGCAGGGACTCGTTTCCGTGGTGACTTTGAGGAACGGATGAACAATATCGTCA
ATGATATTGAAGAAGATGGAAAAGTCATCCTTTTTATTGACGAATTGCATACGATTATGGGGTCTGGTTCGGGAATTGAT
TCGACGCTGGATGCGGCAAATATCCTTAAACCTGCTCTCGCTCGTGGGACTCTCCGGACAGTGGGAGCTACAACGCAGGG
CGAGTATCAGAAGCATATTGAAAAGGATGCTGCCTTGGTTCGACGTTTTGCTAAGGTGACGATTGAGGAGCCAACAGTGG
AAGATAGCATTGCTATTTTGACAGGATTGAAAGGAACCTTTGAGAAATACCATAAGGTCCGCATTGGGGAGGATACTGTT
CGGGTTGCAGTATCTTATGCAAAACGCTATTTAACCAGTAAAAATTTGCCAGATTCTGCGATTGATTTGTTGGATGAAGC
TAGTGCGACGGTTCAAAATCGTATCAAGGGACAGTCTACAGAAACAGGCTTAACCAGTTTGGATAAGGCTTTGATGGCAA
GAAAATATAAGACCGTCAGCAAACTTTTACTCAAAATGAGGGAAGAAGATGAAACTAGTGAGGTTTATGACCTAGAAGTG
ACTGAAGAAGATATTTTGGAAACGCTCAGTCGCCTGTCAGGTATTCCAGTAGCTAAACTTAGTCAGTCAGAGACTAAGAA
GTACTTGAGCCTTGAAGAGGAATTACATAAGCGTGTGATTGGACAAGATGCTGCTATTTCAGCAGTTAGCAGAGCTATTC
GTCGCAATCAGTCGGGCATTCGTACGGGTCGTCGTCCAATTGGTTCTTTTATGTTCTTGGGACCAACAGGAGTTGGTAAG
ACAGAATTGGCTAAGGCCTTGGCTCAAGTACTTTTTGATGATGAGTCAGCCCTTATTCGGTTTGATATGTCCGAATACAT
GGAGAAATTCGCCGCTAGTCGCTTGAATGGAGCGCCACCAGGATATGTGGGTTATGAGGAAGGTGGCGAATTGACTGAGA
AGGTTCGCAATAAGCCTTATTCTGTCTTGCTTTTTGATGAAGTAGAAAAAGCTCATCCTGATATTTTCAATGTTCTTTTG
CAGGTATTGGATGACGGTGTCTTGACCGATAGCAAGGGACGCAAGGTTGACTTCTCCAATACCATCATTATCATGACTTC
CAACCTTGGGGCAACAGCCTTGCGTGATGACAAGACAGTTGGTTTTGGAGCGCTTGATTTGTCGCGTAGCCATGAACATG
TGGAAAAACGAATCTTTGAAGAACTCAAAAAAGCCTACCGTCCAGAATTTATCAACCGTATCGATGAAAAGGTCGTCTTC
CATAGCCTGACAGAAAGTCATATGCAAGATGTTGTCAAGGTTATGGTACAGCCATTGATTGCTGTGGTAGCAGATAAAGG
GATTAGGCTCAAGCTTCAACCATCAGCGCTTAAACTGCTTGCCAAAGAAGGATATGATCCGGAAATGGGAGCTCGTCCAC
TCCGTCGCTTACTACAAACCAAATTGGAAGATCCCTTGGCGGAGATGCTACTTCGTGGAGAGCTACCTACTGGTTTAACC
TTGAAGGTTGGAGTTAAGGGAGCTCAGATTAGGTTTGATATTGTGAATTAA
ATGAAGACTTCAATTGGTTTGCGACAGGCGCTGGAAGATGCACAGTTGGTAGCCCATCGTTATGCTTGTGATTATTTGGA
AACTTGGCATCTACTCTTGTCTTTCGTGTTTAATCATAATACGGTGGCAGGAGCTGTTCTAGCAGAGTATCCAGTTTCTG
TTTCAGACTATGAACATGCTACTTTTGTAGTGACAGGTAAGGTGTACCGTGAGGAGTTGAAGCCTCTTCGCATTTTACCA
TTGTCTAAGCGTTTGGATGAAACAACTAGTTTGGCTAAGAAGATTGCCGAAGTGCTCAAGGCCAAACAGTTTGGTACGGA
ACATCTTTTTATGGCCATGCTATTGGACAAGCGTTCCACAGCTAGTCAGATTTTAGATAAGGTTGGCTTTCATTTTGAGG
ACTCAGATGATAAGATTCGCTTTCTGGATTTACGTAAAAATTTAGAAGCTCGTGCAGGATTCTCCAAGGAAGATTTAAAA
GCCATCCGTAGTGTTATGAAGGGGAGAAAGGCTAGACCAGCTAATGTGGGGCAAATGATGGGAATGCCTCCTACTCCTCA
AAGTGGTGGTCTTGAGGACTATACTCGGGATTTGACAGCTTTGGCTCGTGATGGCAAGATAGAGCCTGTCATCGGTCGGG
ATGCGGAACTTTCTCGAATGATTCAAATCCTGTCTCGTAAAACGAAGAATAACCCTGTCTTGGTTGGGGAGGCTGGTGTA
GGAAAAACAGCTCTTGCTCTTGGTCTTGCTCAACGTGTAGCAGATGGTGACGTGCCTACTAGTCTGCTTGATATGCGCGT
CTTGGAGTTGGATTTGATGAGTGTCATCGCAGGGACTCGTTTCCGTGGTGACTTTGAGGAACGGATGAACAATATCGTCA
ATGATATTGAAGAAGATGGAAAAGTCATCCTTTTTATTGACGAATTGCATACGATTATGGGGTCTGGTTCGGGAATTGAT
TCGACGCTGGATGCGGCAAATATCCTTAAACCTGCTCTCGCTCGTGGGACTCTCCGGACAGTGGGAGCTACAACGCAGGG
CGAGTATCAGAAGCATATTGAAAAGGATGCTGCCTTGGTTCGACGTTTTGCTAAGGTGACGATTGAGGAGCCAACAGTGG
AAGATAGCATTGCTATTTTGACAGGATTGAAAGGAACCTTTGAGAAATACCATAAGGTCCGCATTGGGGAGGATACTGTT
CGGGTTGCAGTATCTTATGCAAAACGCTATTTAACCAGTAAAAATTTGCCAGATTCTGCGATTGATTTGTTGGATGAAGC
TAGTGCGACGGTTCAAAATCGTATCAAGGGACAGTCTACAGAAACAGGCTTAACCAGTTTGGATAAGGCTTTGATGGCAA
GAAAATATAAGACCGTCAGCAAACTTTTACTCAAAATGAGGGAAGAAGATGAAACTAGTGAGGTTTATGACCTAGAAGTG
ACTGAAGAAGATATTTTGGAAACGCTCAGTCGCCTGTCAGGTATTCCAGTAGCTAAACTTAGTCAGTCAGAGACTAAGAA
GTACTTGAGCCTTGAAGAGGAATTACATAAGCGTGTGATTGGACAAGATGCTGCTATTTCAGCAGTTAGCAGAGCTATTC
GTCGCAATCAGTCGGGCATTCGTACGGGTCGTCGTCCAATTGGTTCTTTTATGTTCTTGGGACCAACAGGAGTTGGTAAG
ACAGAATTGGCTAAGGCCTTGGCTCAAGTACTTTTTGATGATGAGTCAGCCCTTATTCGGTTTGATATGTCCGAATACAT
GGAGAAATTCGCCGCTAGTCGCTTGAATGGAGCGCCACCAGGATATGTGGGTTATGAGGAAGGTGGCGAATTGACTGAGA
AGGTTCGCAATAAGCCTTATTCTGTCTTGCTTTTTGATGAAGTAGAAAAAGCTCATCCTGATATTTTCAATGTTCTTTTG
CAGGTATTGGATGACGGTGTCTTGACCGATAGCAAGGGACGCAAGGTTGACTTCTCCAATACCATCATTATCATGACTTC
CAACCTTGGGGCAACAGCCTTGCGTGATGACAAGACAGTTGGTTTTGGAGCGCTTGATTTGTCGCGTAGCCATGAACATG
TGGAAAAACGAATCTTTGAAGAACTCAAAAAAGCCTACCGTCCAGAATTTATCAACCGTATCGATGAAAAGGTCGTCTTC
CATAGCCTGACAGAAAGTCATATGCAAGATGTTGTCAAGGTTATGGTACAGCCATTGATTGCTGTGGTAGCAGATAAAGG
GATTAGGCTCAAGCTTCAACCATCAGCGCTTAAACTGCTTGCCAAAGAAGGATATGATCCGGAAATGGGAGCTCGTCCAC
TCCGTCGCTTACTACAAACCAAATTGGAAGATCCCTTGGCGGAGATGCTACTTCGTGGAGAGCTACCTACTGGTTTAACC
TTGAAGGTTGGAGTTAAGGGAGCTCAGATTAGGTTTGATATTGTGAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
69.325 |
99.877 |
0.692 |
| clpC | Streptococcus pneumoniae Rx1 |
69.325 |
99.877 |
0.692 |
| clpC | Streptococcus pneumoniae D39 |
69.325 |
99.877 |
0.692 |
| clpC | Streptococcus mutans UA159 |
65.725 |
99.755 |
0.656 |
| clpC | Streptococcus thermophilus LMD-9 |
64.409 |
99.51 |
0.641 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.409 |
99.51 |
0.641 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.619 |
100 |
0.496 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.618 |
98.897 |
0.431 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.511 |
79.167 |
0.36 |