Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | SR187_RS05080 | Genome accession | NZ_AP018400 |
| Coordinates | 1045929..1047155 (-) | Length | 408 a.a. |
| NCBI ID | WP_024532031.1 | Uniprot ID | A0A2Z5TMW9 |
| Organism | Streptococcus ruminantium strain GUT-187 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1040929..1052155
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SR187_RS05060 (SR187_5175) | - | 1041534..1042850 (-) | 1317 | WP_120171716.1 | excalibur calcium-binding domain-containing protein | - |
| SR187_RS05065 (SR187_5180) | - | 1042983..1043165 (+) | 183 | WP_120171717.1 | 4-oxalocrotonate tautomerase | - |
| SR187_RS05070 (SR187_5185) | lepA | 1043239..1045071 (-) | 1833 | WP_024532033.1 | translation elongation factor 4 | - |
| SR187_RS05075 (SR187_5190) | yihA | 1045282..1045869 (-) | 588 | WP_024532032.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| SR187_RS05080 (SR187_5195) | clpX | 1045929..1047155 (-) | 1227 | WP_024532031.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| SR187_RS05090 (SR187_5205) | - | 1047355..1047867 (-) | 513 | WP_120171718.1 | dihydrofolate reductase | - |
| SR187_RS05095 (SR187_5210) | - | 1048279..1049118 (-) | 840 | WP_024532029.1 | thymidylate synthase | - |
| SR187_RS05100 (SR187_5215) | - | 1049170..1049361 (-) | 192 | WP_145981831.1 | hypothetical protein | - |
| SR187_RS05110 (SR187_5220) | - | 1049782..1050741 (-) | 960 | WP_120171720.1 | ROK family glucokinase | - |
| SR187_RS05115 (SR187_5225) | - | 1050944..1051279 (-) | 336 | WP_024532025.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 408 a.a. Molecular weight: 45410.93 Da Isoelectric Point: 4.6108
>NTDB_id=69454 SR187_RS05080 WP_024532031.1 1045929..1047155(-) (clpX) [Streptococcus ruminantium strain GUT-187]
MAVKHTHELIYCSFCGKNQEEVKKIIAGNNVFICNECVELAQEIIREELAEEVLTDLADTPKPQELLNILNNYVIGQDRA
KRALAVAVYNHYKRINFQDSRDDNDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENIL
LKLLQAADFNIDRAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIHVDTKN
ILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNRAIDEKESYMQHIIADDIQKFGIIPELIGRLPVFAALDQLTTEDLIRIL
TEPKNALVKQYQTLLSYDDVELEFDEDALEEIAKKAIERKTGARGLRSIIEETMLDVMFEVPGQDEVKRVRVTKAAVNGK
EKPLLETA
MAVKHTHELIYCSFCGKNQEEVKKIIAGNNVFICNECVELAQEIIREELAEEVLTDLADTPKPQELLNILNNYVIGQDRA
KRALAVAVYNHYKRINFQDSRDDNDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENIL
LKLLQAADFNIDRAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIHVDTKN
ILFIVGGAFDGIEEIVKQRLGEKIIGFGQNNRAIDEKESYMQHIIADDIQKFGIIPELIGRLPVFAALDQLTTEDLIRIL
TEPKNALVKQYQTLLSYDDVELEFDEDALEEIAKKAIERKTGARGLRSIIEETMLDVMFEVPGQDEVKRVRVTKAAVNGK
EKPLLETA
Nucleotide
Download Length: 1227 bp
>NTDB_id=69454 SR187_RS05080 WP_024532031.1 1045929..1047155(-) (clpX) [Streptococcus ruminantium strain GUT-187]
ATGGCTGTTAAGCATACACATGAGCTTATTTACTGCTCATTTTGTGGAAAAAATCAAGAAGAAGTCAAAAAAATTATTGC
CGGAAACAATGTATTTATCTGTAATGAATGTGTCGAATTAGCACAAGAAATCATTCGTGAGGAATTGGCAGAAGAAGTTC
TAACAGACTTGGCTGATACGCCAAAACCACAGGAATTATTAAATATCCTAAACAACTATGTCATCGGACAAGACCGGGCG
AAACGTGCGCTGGCAGTGGCGGTTTATAACCACTATAAGCGAATCAATTTTCAAGACAGTCGTGATGATAATGATGTTGA
TTTACAAAAATCAAATATCCTCATGATTGGACCAACTGGATCTGGTAAAACCTTCTTAGCACAGACTCTCGCTAAAAGTT
TGAATGTGCCATTTGCGATTGCAGATGCCACAGCCTTGACAGAAGCAGGTTATGTTGGTGAGGATGTAGAAAATATCCTT
CTCAAACTCTTGCAGGCGGCAGATTTCAATATTGACCGTGCAGAAAGAGGAATTATCTATGTGGATGAAATTGATAAAAT
TGCCAAAAAAGGTGAAAACGTGTCCATTACGCGGGATGTATCTGGTGAAGGTGTTCAGCAGGCTCTCCTAAAAATTATCG
AGGGGACAGTTGCTAGCGTACCACCACAGGGAGGACGTAAACATCCAAACCAAGAGATGATTCATGTAGACACCAAGAAC
ATCCTCTTCATCGTAGGTGGCGCTTTTGATGGTATTGAGGAAATTGTTAAACAACGTCTCGGCGAAAAAATTATTGGATT
TGGTCAGAATAATCGTGCCATTGATGAAAAAGAATCCTACATGCAACATATTATCGCTGATGATATTCAAAAATTTGGTA
TCATTCCAGAATTGATTGGTCGTTTACCAGTTTTTGCAGCTCTGGATCAACTGACAACAGAGGATTTGATTCGCATTCTG
ACTGAACCTAAAAATGCTCTTGTGAAGCAATACCAAACGCTCCTTTCGTACGATGATGTGGAATTAGAATTTGACGAGGA
TGCCTTGGAGGAAATTGCTAAAAAAGCAATTGAGCGTAAAACAGGTGCTCGTGGTCTTCGCTCCATTATTGAGGAAACAA
TGCTGGATGTCATGTTTGAAGTGCCGGGTCAAGATGAGGTTAAGCGTGTTCGAGTAACCAAAGCTGCAGTAAATGGCAAG
GAAAAGCCACTACTAGAAACTGCTTAA
ATGGCTGTTAAGCATACACATGAGCTTATTTACTGCTCATTTTGTGGAAAAAATCAAGAAGAAGTCAAAAAAATTATTGC
CGGAAACAATGTATTTATCTGTAATGAATGTGTCGAATTAGCACAAGAAATCATTCGTGAGGAATTGGCAGAAGAAGTTC
TAACAGACTTGGCTGATACGCCAAAACCACAGGAATTATTAAATATCCTAAACAACTATGTCATCGGACAAGACCGGGCG
AAACGTGCGCTGGCAGTGGCGGTTTATAACCACTATAAGCGAATCAATTTTCAAGACAGTCGTGATGATAATGATGTTGA
TTTACAAAAATCAAATATCCTCATGATTGGACCAACTGGATCTGGTAAAACCTTCTTAGCACAGACTCTCGCTAAAAGTT
TGAATGTGCCATTTGCGATTGCAGATGCCACAGCCTTGACAGAAGCAGGTTATGTTGGTGAGGATGTAGAAAATATCCTT
CTCAAACTCTTGCAGGCGGCAGATTTCAATATTGACCGTGCAGAAAGAGGAATTATCTATGTGGATGAAATTGATAAAAT
TGCCAAAAAAGGTGAAAACGTGTCCATTACGCGGGATGTATCTGGTGAAGGTGTTCAGCAGGCTCTCCTAAAAATTATCG
AGGGGACAGTTGCTAGCGTACCACCACAGGGAGGACGTAAACATCCAAACCAAGAGATGATTCATGTAGACACCAAGAAC
ATCCTCTTCATCGTAGGTGGCGCTTTTGATGGTATTGAGGAAATTGTTAAACAACGTCTCGGCGAAAAAATTATTGGATT
TGGTCAGAATAATCGTGCCATTGATGAAAAAGAATCCTACATGCAACATATTATCGCTGATGATATTCAAAAATTTGGTA
TCATTCCAGAATTGATTGGTCGTTTACCAGTTTTTGCAGCTCTGGATCAACTGACAACAGAGGATTTGATTCGCATTCTG
ACTGAACCTAAAAATGCTCTTGTGAAGCAATACCAAACGCTCCTTTCGTACGATGATGTGGAATTAGAATTTGACGAGGA
TGCCTTGGAGGAAATTGCTAAAAAAGCAATTGAGCGTAAAACAGGTGCTCGTGGTCTTCGCTCCATTATTGAGGAAACAA
TGCTGGATGTCATGTTTGAAGTGCCGGGTCAAGATGAGGTTAAGCGTGTTCGAGTAACCAAAGCTGCAGTAAATGGCAAG
GAAAAGCCACTACTAGAAACTGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
83.374 |
100 |
0.836 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
57.96 |
98.529 |
0.571 |