Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   M8779_RS01875 Genome accession   NZ_CP097846
Coordinates   336566..337210 (+) Length   214 a.a.
NCBI ID   WP_003689466.1    Uniprot ID   Q5F6K3
Organism   Neisseria gonorrhoeae strain AT159     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 331566..342210
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8779_RS01855 (M8779_01850) putP 331750..333276 (-) 1527 WP_003689473.1 sodium/proline symporter PutP -
  M8779_RS01860 (M8779_01855) - 333764..334084 (+) 321 WP_002216505.1 accessory factor UbiK family protein -
  M8779_RS01865 (M8779_01860) comM 334098..335594 (+) 1497 WP_048339516.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  M8779_RS01870 (M8779_01865) ftsN 335700..336563 (+) 864 WP_010360712.1 cell division protein FtsN -
  M8779_RS01875 (M8779_01870) dsbA1 336566..337210 (+) 645 WP_003689466.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  M8779_RS01880 (M8779_01875) - 337243..338064 (+) 822 WP_003689465.1 undecaprenyl-diphosphate phosphatase -
  M8779_RS01895 (M8779_01890) - 338505..339752 (-) 1248 WP_010951292.1 class I SAM-dependent methyltransferase -
  M8779_RS01900 (M8779_01895) mraZ 340031..340486 (+) 456 WP_149032473.1 division/cell wall cluster transcriptional repressor MraZ -
  M8779_RS01905 (M8779_01900) rsmH 340483..341439 (+) 957 WP_003689462.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  M8779_RS01910 (M8779_01905) ftsL 341466..341729 (+) 264 WP_003701583.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24003.07 Da        Isoelectric Point: 9.9225

>NTDB_id=692977 M8779_RS01875 WP_003689466.1 336566..337210(+) (dsbA1) [Neisseria gonorrhoeae strain AT159]
MKFKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQPGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDTYLRTEH
VVWRPEMLGLARMAAAVKLSGLKYQANSAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAVALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=692977 M8779_RS01875 WP_003689466.1 336566..337210(+) (dsbA1) [Neisseria gonorrhoeae strain AT159]
ATGAAGTTTAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGCCGGGAAAAATTGAGGTTTTGGAATTTTTCGGCTATTTTTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAACTGGGCAAGGCATTGCCGTCTGATACTTATCTGCGGACGGAGCAC
GTGGTCTGGCGGCCTGAAATGCTCGGTCTGGCAAGAATGGCTGCTGCGGTCAAGCTGTCGGGTTTGAAATATCAGGCAAA
CTCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGTTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTATCTC
AAAAAGGTTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGTCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACAGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGATGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5F6K3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

57.219

87.383

0.5
  dsbA2 Neisseria meningitidis MC58

52.688

86.916

0.458