Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   M9H69_RS02035 Genome accession   NZ_CP097843
Coordinates   379781..380830 (+) Length   349 a.a.
NCBI ID   WP_250315780.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 374781..385830
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS02010 (M9H69_02010) dnaJ 376350..377486 (+) 1137 WP_001066316.1 molecular chaperone DnaJ -
  M9H69_RS02015 (M9H69_02015) - 377564..378223 (-) 660 WP_250315779.1 hypothetical protein -
  M9H69_RS02020 (M9H69_02020) - 378287..378565 (-) 279 WP_000777742.1 hypothetical protein -
  M9H69_RS02025 (M9H69_02025) - 378575..378985 (-) 411 WP_001278323.1 HIT family protein -
  M9H69_RS02030 (M9H69_02030) pptA 379053..379784 (+) 732 WP_131200793.1 ABC transporter ATP-binding protein Regulator
  M9H69_RS02035 (M9H69_02035) pptB 379781..380830 (+) 1050 WP_250315780.1 ABC transporter permease Regulator
  M9H69_RS02040 (M9H69_02040) - 380878..381672 (+) 795 WP_250315781.1 cell cycle regulator CcrZ -
  M9H69_RS02045 (M9H69_02045) trmB 381669..382304 (+) 636 WP_001266088.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  M9H69_RS02050 (M9H69_02050) rimP 382431..382910 (+) 480 WP_000338695.1 ribosome maturation factor RimP -
  M9H69_RS02055 (M9H69_02055) nusA 382953..384089 (+) 1137 WP_000032280.1 transcription termination factor NusA -
  M9H69_RS02060 (M9H69_02060) - 384111..384404 (+) 294 WP_250315782.1 YlxR family protein -
  M9H69_RS02065 (M9H69_02065) - 384397..384696 (+) 300 WP_001041396.1 YlxQ-related RNA-binding protein -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 40415.38 Da        Isoelectric Point: 9.8012

>NTDB_id=692916 M9H69_RS02035 WP_250315780.1 379781..380830(+) (pptB) [Streptococcus oralis strain HP01]
MKDLFLKRKQAFRKECVGYLRYVLNDHFVLFLLVLIGFLSYQYSQLLQDFPENHWPILLFLGIVSTLLLAWGGIATYMEA
PDKLFLLVSEEEVKSHLKEQTVRSLVFWLFVQTLFLLLFAPLFLAMGYGLPVFLAYVLLLGAGKYLVFRQKASKFFTETG
LDWDYVIAQESKRKQVLLRFFALFTQVKGVSNSVKRRAYLDFILKAVQKVPGKIWQNLYLRSYLRNGDLFALSLRLLFLS
LLALLFIEQVWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLEKGEKERGLKQIVVGVGIAVLLLELLVGAVVFQE
KIALLALVGASLFLQLFYLPYQLKRLVDE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=692916 M9H69_RS02035 WP_250315780.1 379781..380830(+) (pptB) [Streptococcus oralis strain HP01]
ATGAAAGACTTGTTTTTAAAGCGAAAGCAGGCTTTTCGTAAGGAGTGTGTCGGTTATCTGCGTTATGTTCTCAATGACCA
CTTTGTCTTGTTCCTACTAGTTCTCATCGGTTTTCTATCTTACCAGTACAGTCAACTCTTGCAAGATTTTCCTGAAAATC
ATTGGCCCATCCTCTTGTTTTTGGGGATTGTATCTACCTTGCTTTTGGCTTGGGGAGGGATTGCCACATATATGGAGGCA
CCTGACAAGCTCTTTCTCTTAGTCAGTGAAGAAGAGGTTAAGTCCCATCTCAAAGAGCAGACGGTACGCTCACTGGTCTT
TTGGCTCTTTGTCCAAACCCTTTTCTTGCTTTTATTTGCGCCCTTATTTTTAGCCATGGGCTATGGTTTGCCAGTCTTTC
TTGCCTATGTGCTTTTATTAGGAGCTGGGAAATACCTAGTCTTTCGTCAAAAAGCCAGCAAATTTTTCACTGAAACTGGA
CTGGACTGGGACTATGTGATTGCCCAAGAAAGCAAGCGCAAGCAAGTCTTGCTTCGTTTCTTTGCTCTCTTTACTCAGGT
CAAGGGCGTTTCAAATAGTGTCAAGCGTCGGGCCTATCTGGACTTTATCCTAAAGGCTGTTCAAAAGGTACCTGGCAAGA
TCTGGCAAAACCTCTACCTTCGTTCTTACCTGCGAAATGGAGATCTCTTTGCTCTCAGTTTGCGCCTCTTGTTCCTATCC
TTGTTAGCTTTGCTCTTTATCGAGCAAGTTTGGATCGCAACGGCAGTGGTAGTTCTATTTAACTACCTCTTGCTCTTCCA
GTTACTGGCCCTCTATCATGCCTTTGACTACCAATACTTGACCCAGCTCTTTCCATTAGAAAAAGGGGAGAAAGAGAGGG
GATTGAAACAGATTGTAGTCGGTGTGGGAATTGCAGTTCTTTTGTTAGAATTGCTGGTCGGAGCAGTGGTTTTTCAAGAA
AAAATAGCCTTGTTGGCTCTTGTAGGGGCTAGTCTCTTCCTACAACTGTTTTATTTGCCTTACCAACTAAAAAGATTGGT
TGACGAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus salivarius strain HSISS4

48

100

0.481

  pptB Streptococcus thermophilus LMD-9

46.857

100

0.47