Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   M9H69_RS01620 Genome accession   NZ_CP097843
Coordinates   289848..290885 (+) Length   345 a.a.
NCBI ID   WP_250315735.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 284848..295885
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS01585 (M9H69_01585) yidC 284882..285811 (-) 930 WP_033588985.1 membrane protein insertase YidC -
  M9H69_RS01590 (M9H69_01590) - 285889..286167 (-) 279 WP_001174620.1 acylphosphatase -
  M9H69_RS01595 (M9H69_01595) - 286201..286941 (+) 741 WP_009730686.1 RNA methyltransferase -
  M9H69_RS01600 (M9H69_01600) - 286997..287680 (+) 684 WP_084940416.1 Bax inhibitor-1/YccA family protein -
  M9H69_RS01605 (M9H69_01605) asnA 287790..288782 (+) 993 WP_000747987.1 aspartate--ammonia ligase -
  M9H69_RS01610 (M9H69_01610) rsmD 288847..289386 (+) 540 WP_250315733.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  M9H69_RS01615 (M9H69_01615) coaD 289376..289864 (+) 489 WP_250315734.1 pantetheine-phosphate adenylyltransferase -
  M9H69_RS01620 (M9H69_01620) sepM 289848..290885 (+) 1038 WP_250315735.1 SepM family pheromone-processing serine protease Regulator
  M9H69_RS01625 (M9H69_01625) - 290941..291171 (+) 231 WP_084911818.1 DUF1146 family protein -
  M9H69_RS01630 (M9H69_01630) murA 291195..292478 (+) 1284 WP_084874506.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  M9H69_RS01635 (M9H69_01635) - 292465..292659 (+) 195 WP_061415718.1 DNA-directed RNA polymerase subunit beta -
  M9H69_RS01640 (M9H69_01640) endA 292700..293524 (+) 825 WP_250315736.1 DNA/RNA non-specific endonuclease Machinery gene
  M9H69_RS01645 (M9H69_01645) - 293660..294991 (+) 1332 WP_250315737.1 hemolysin family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37482.65 Da        Isoelectric Point: 5.5230

>NTDB_id=692908 M9H69_RS01620 WP_250315735.1 289848..290885(+) (sepM) [Streptococcus oralis strain HP01]
MKKKTRWPLYVILALVVTFLAFVVPLPYYIEVPGGAEDIRQVLKVNETEDTEAGAYQFVTVGIRHATLSHLVYAWLTPFT
DIRSAKETTGGSTDAEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNIADTVTAVNDKTF
DSSKDLVDYVNSQQLGDTVKVTYEEDGKVKSAEGKIITLENGKNGIGIGLIDRTEVTSNVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVAASRQGANVFFAPDNPVTEEAKKADPNAKSNYETALEAAK
TIKTEMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=692908 M9H69_RS01620 WP_250315735.1 289848..290885(+) (sepM) [Streptococcus oralis strain HP01]
ATGAAGAAAAAAACTAGATGGCCCTTATATGTCATCCTAGCACTAGTAGTGACTTTTTTAGCCTTTGTAGTACCTTTACC
TTACTACATAGAAGTTCCAGGTGGAGCGGAAGATATTCGTCAAGTTTTAAAAGTCAATGAAACAGAAGATACAGAAGCAG
GAGCTTACCAGTTTGTGACAGTTGGTATTCGGCATGCAACTCTGTCGCATCTTGTCTATGCTTGGTTAACACCTTTCACG
GATATTAGAAGTGCCAAGGAGACTACGGGTGGCTCTACGGATGCAGAGTTTATGCGGATCAATCAGTTCTATATGCAAAC
GTCCCAAAACATGGCCAAGTATCAAGGATTGAAGACGGCTGGAAAGGATATCGAACTCAAGTATCTGGGTGTTTACGTCT
TAACCGTGACAGACAATTCAACTTTTAAAGGCATTCTGAACATTGCAGACACAGTGACGGCTGTTAACGACAAAACATTT
GACAGTTCCAAAGACTTGGTCGACTATGTCAACTCTCAACAATTAGGGGACACGGTCAAAGTGACCTATGAGGAAGACGG
AAAAGTCAAGTCTGCTGAAGGTAAAATTATCACTCTAGAAAATGGGAAAAACGGGATTGGGATTGGTTTGATTGACCGTA
CGGAAGTGACCAGTAATGTTCCCATTCGCTTTTCAACAGCTGGTATCGGGGGACCAAGTGCCGGTCTTATGTTTAGTCTA
GCTATTTACACCCAGATAGCAGATCCAGGACTTCGTAATGGCCGTATCGTTGCGGGAACGGGAACCATTGATCGGGACGG
AAATGTTGGCGACATTGGTGGAATTGACAAAAAAGTAGTTGCAGCCTCTCGTCAGGGAGCCAACGTCTTTTTTGCCCCTG
ACAATCCAGTCACTGAGGAAGCAAAAAAAGCAGATCCCAATGCGAAAAGCAACTATGAAACAGCCCTAGAAGCTGCCAAA
ACTATCAAGACAGAGATGAAAATCGTTCCCGTTAAAACCTTGCAGGATGCGATTGATTACCTTAAAAACAACCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.064

99.13

0.586