Detailed information NTG0692255

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: LZG51_RS23275
• Genome accession: NZ_CP114128
• Coordinates: 4769987..4771012 (+)
• Length: 341 a.a.
• NCBI ID: WP_096220508.1
• Uniprot ID: -
• Organism: Escherichia coli strain PE164
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4764987..4776012

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LZG51_RS23255 (LZG51_023170)	metJ	4766048..4766365 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
LZG51_RS23260 (LZG51_023175)	yiiX	4766549..4767157 (+)	609	WP_053884370.1	YiiX family permuted papain-like enzyme	-
LZG51_RS23265 (LZG51_023180)	rpmE	4767218..4767430 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
LZG51_RS23270 (LZG51_023185)	priA	4767633..4769831 (+)	2199	WP_028132629.1	primosomal protein N'	Machinery gene
LZG51_RS23275 (LZG51_023190)	cytR	4769987..4771012 (+)	1026	WP_096220508.1	DNA-binding transcriptional regulator CytR	Regulator
LZG51_RS23280 (LZG51_023195)	ftsN	4771104..4772063 (+)	960	WP_000068837.1	cell division protein FtsN	-
LZG51_RS23285 (LZG51_023200)	hslV	4772156..4772686 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
LZG51_RS23290 (LZG51_023205)	hslU	4772696..4774027 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
LZG51_RS23295 (LZG51_023210)	menA	4774094..4775020 (+)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
LZG51_RS23300 (LZG51_023215)	rraA	4775113..4775598 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37849.81 Da
• Isoelectric Point: 6.3842

>NTDB_id=692255 LZG51_RS23275 WP_096220508.1 4769987..4771012(+) (cytR) [Escherichia coli strain PE164]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLISDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=692255 LZG51_RS23275 WP_096220508.1 4769987..4771012(+) (cytR) [Escherichia coli strain PE164]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATAGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTAGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTAATGGCACTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCACGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625