Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | EP178_RS00675 | Genome accession | NZ_AP018377 |
| Coordinates | 107368..107967 (-) | Length | 199 a.a. |
| NCBI ID | WP_047926976.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain FC428 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 102368..112967
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EP178_RS00660 (NgFC428_00090) | pilQ | 103943..106138 (-) | 2196 | WP_003687350.1 | type IV pilus secretin PilQ | Machinery gene |
| EP178_RS00665 (NgFC428_00091) | pilP | 106157..106702 (-) | 546 | WP_003692554.1 | pilus assembly protein PilP | Machinery gene |
| EP178_RS00670 (NgFC428_00092) | - | 106720..107367 (-) | 648 | WP_003690570.1 | type 4a pilus biogenesis protein PilO | - |
| EP178_RS00675 (NgFC428_00093) | pilN | 107368..107967 (-) | 600 | WP_047926976.1 | PilN domain-containing protein | Machinery gene |
| EP178_RS00680 (NgFC428_00094) | pilM | 107970..109085 (-) | 1116 | WP_003696683.1 | type IV pilus biogenesis protein PilM | - |
| EP178_RS00685 (NgFC428_00095) | - | 109237..111633 (+) | 2397 | WP_003690571.1 | penicillin-binding protein 1A | - |
| EP178_RS00690 (NgFC428_00096) | yihA | 111754..112383 (-) | 630 | WP_003687358.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22283.64 Da Isoelectric Point: 9.7317
>NTDB_id=69158 EP178_RS00675 WP_047926976.1 107368..107967(-) (pilN) [Neisseria gonorrhoeae strain FC428]
MNNLIKINLLPYREEMNKRKQQQFKTLMYGVVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
MNNLIKINLLPYREEMNKRKQQQFKTLMYGVVLTGVAAVAATYLFIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQE
KDAFLIKKNKIEELQIKRLQAAKILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN
Nucleotide
Download Length: 600 bp
>NTDB_id=69158 EP178_RS00675 WP_047926976.1 107368..107967(-) (pilN) [Neisseria gonorrhoeae strain FC428]
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGCGTCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGAGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
ATGAACAATTTAATCAAAATCAACCTCCTCCCCTACAGGGAAGAGATGAACAAACGCAAACAGCAGCAGTTTAAAACGCT
GATGTACGGCGTCGTGCTGACGGGCGTTGCCGCCGTTGCGGCAACCTACCTGTTTATCGACAATATGATCAATAAACAGT
CGGAAAAAAACACGCTGCTGGAAATCTCCATCGCACACTTGGATACCGAGCTGTCGGAAATACAAAAGCTCAAACAGGAA
AAAGATGCCTTCCTGATTAAGAAAAACAAAATCGAGGAGCTCCAGATCAAACGCCTCCAAGCCGCAAAAATCCTCGACAG
CCTGAATGAGGCCGTCCCCGGAAGCACCTACCTAACCTCGCTGGATGCCGTTACCGCCGACTCTTATCGGCTCAGCGGCA
GGACATCCAGCGACAACCGCGTTGCCGCCATGATGAGGGCGATGCCCAATACCGGCATATTCAAGCAACCCGAATTGTTA
AGCATCAAGAAAAACAATTCGCATCAAGAATTTACCCTTCAGGCAACATTACAACCTATCGTAAAGGCGGCCGAATCCAA
AGAGAATCCGGCTTCGGGAAACGCACAGGAGGCAAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Neisseria meningitidis strain C311 |
97.487 |
100 |
0.975 |