Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   D8S83_RS05165 Genome accession   NZ_AP018349
Coordinates   1043548..1044534 (+) Length   328 a.a.
NCBI ID   WP_020977132.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GN1     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1038548..1049534
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D8S83_RS05135 tnpA 1038614..1039099 (+) 486 WP_000093393.1 IS200/IS605 family transposase -
  D8S83_RS05140 - 1039220..1039723 (+) 504 Protein_965 ABC transporter permease -
  D8S83_RS05145 opp4C 1039735..1040616 (+) 882 WP_001180264.1 oligopeptide ABC transporter permease -
  D8S83_RS05150 trpS 1040658..1041647 (-) 990 WP_000448931.1 tryptophan--tRNA ligase -
  D8S83_RS05155 spxA 1041942..1042337 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  D8S83_RS05160 mecA 1042708..1043427 (+) 720 WP_001217728.1 adaptor protein MecA -
  D8S83_RS05165 coiA 1043548..1044534 (+) 987 WP_020977132.1 competence protein CoiA family protein Machinery gene
  D8S83_RS05170 pepF 1044582..1046390 (+) 1809 WP_020977133.1 oligoendopeptidase F -
  D8S83_RS05175 tnpA 1046985..1047470 (+) 486 WP_000093393.1 IS200/IS605 family transposase -
  D8S83_RS05180 yjbH 1047593..1048399 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  D8S83_RS05185 - 1048422..1048787 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  D8S83_RS05190 - 1048891..1049484 (-) 594 WP_000224622.1 CYTH domain-containing protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38634.19 Da        Isoelectric Point: 9.6530

>NTDB_id=69116 D8S83_RS05165 WP_020977132.1 1043548..1044534(+) (coiA) [Staphylococcus aureus strain GN1]
MLVALNGEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EMEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=69116 D8S83_RS05165 WP_020977132.1 1043548..1044534(+) (coiA) [Staphylococcus aureus strain GN1]
ATGTTAGTAGCTTTAAATGGAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATGGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(10-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.341

100

0.963
  coiA Staphylococcus aureus MW2

96.341

100

0.963

Multiple sequence alignment