Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   STO1_RS07945 Genome accession   NZ_AP018338
Coordinates   1539511..1540242 (-) Length   243 a.a.
NCBI ID   WP_096422737.1    Uniprot ID   A0A223ZVQ9
Organism   Streptococcus oralis subsp. tigurinus strain osk_001     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1534511..1545242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STO1_RS07910 (STO1_015160) - 1534599..1534898 (-) 300 WP_057489397.1 YlxQ-related RNA-binding protein -
  STO1_RS07915 (STO1_015170) rnpM 1534891..1535184 (-) 294 WP_000857560.1 RNase P modulator RnpM -
  STO1_RS07920 (STO1_015180) nusA 1535206..1536342 (-) 1137 WP_000032278.1 transcription termination factor NusA -
  STO1_RS07925 (STO1_015190) rimP 1536385..1536864 (-) 480 WP_084911995.1 ribosome maturation factor RimP -
  STO1_RS07930 (STO1_015200) trmB 1536991..1537626 (-) 636 WP_096422733.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  STO1_RS07935 (STO1_015210) ccrZ 1537623..1538417 (-) 795 WP_000363023.1 cell cycle regulator CcrZ -
  STO1_RS07940 (STO1_015220) - 1538465..1539514 (-) 1050 WP_096422735.1 ABC transporter permease -
  STO1_RS07945 (STO1_015230) pptA 1539511..1540242 (-) 732 WP_096422737.1 ABC transporter ATP-binding protein Regulator
  STO1_RS07950 (STO1_015240) - 1540310..1540720 (+) 411 WP_096422739.1 HIT family protein -
  STO1_RS07955 (STO1_015250) - 1540730..1541017 (+) 288 WP_096422741.1 hypothetical protein -
  STO1_RS07960 (STO1_015260) - 1541085..1541738 (+) 654 WP_172843652.1 hypothetical protein -
  STO1_RS07965 (STO1_015270) dnaJ 1541816..1542952 (-) 1137 WP_001066316.1 molecular chaperone DnaJ -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27213.67 Da        Isoelectric Point: 4.7159

>NTDB_id=69074 STO1_RS07945 WP_096422737.1 1539511..1540242(-) (pptA) [Streptococcus oralis subsp. tigurinus strain osk_001]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLTPYSGEIKINGLTLREDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFDRVEPLLKMFRLDQKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAQGNLQQLREAFDMPEASLNDIYLALTKE
EEL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=69074 STO1_RS07945 WP_096422737.1 1539511..1540242(-) (pptA) [Streptococcus oralis subsp. tigurinus strain osk_001]
ATGTTAGAAATTAAAAACCTGACAGGAGGCTATGTTCATGTTCCTGTCTTGAAAGATGTGTCCTTTACCGTTGAAAGTGG
GCAGTTGGTTGGTTTGATTGGTCTCAACGGTGCTGGGAAATCAACGACAATTAATGAGATCATTGGTCTGTTGACACCTT
ACAGTGGGGAAATCAAGATTAACGGTCTCACCTTGCGAGAAGATGCGACCAGCTATCGCAAGCAGATTGGCTATATCCCA
GAAACGCCTAGCTTGTATGAAGAACTGACCCTCAGAGAGCATATCGAGACGGTTGCCATGGCCTATGGTATTGAGCAAAA
AGTGGCCTTTGATCGAGTAGAACCTTTGTTGAAAATGTTCCGTCTGGATCAAAAATTAGACTGGTTTCCAGTGCATTTCT
CCAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTGTCGTGGATCCGAGTCTTTTCATCGTTGACGAGCCTTTT
CTTGGCCTCGATCCGCTGGCTATTTCTGACTTGATTCAGCTTTTGGAAGTAGAAAAGCAAAAAGGCAAGTCTATCCTCAT
GAGTACCCACGTGCTGGACTCGGCTGAGAAGATGTGTGACGCCTTTGTTATTCTCCACAAGGGGGAGGTGAGGGCTCAGG
GGAACCTCCAGCAACTGCGCGAAGCCTTTGACATGCCTGAAGCGAGTTTGAATGATATTTACTTGGCTCTGACCAAAGAG
GAGGAGCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223ZVQ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

73.029

99.177

0.724
  pptA Streptococcus thermophilus LMD-9

72.199

99.177

0.716

Multiple sequence alignment