Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   STO1_RS05705 Genome accession   NZ_AP018338
Coordinates   1130823..1132625 (-) Length   600 a.a.
NCBI ID   WP_096422370.1    Uniprot ID   A0A224A7I6
Organism   Streptococcus oralis subsp. tigurinus strain osk_001     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1125823..1137625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STO1_RS05690 (STO1_011070) ftsW 1127689..1128912 (-) 1224 WP_000703351.1 cell division peptidoglycan polymerase FtsW -
  STO1_RS05695 (STO1_011080) prsA 1129099..1130040 (-) 942 WP_096422368.1 peptidylprolyl isomerase PrsA -
  STO1_RS05700 (STO1_011090) - 1130108..1130821 (-) 714 WP_096423000.1 O-methyltransferase -
  STO1_RS05705 (STO1_011100) pepF 1130823..1132625 (-) 1803 WP_096422370.1 oligoendopeptidase F Regulator
  STO1_RS05710 (STO1_011110) coiA 1132644..1133600 (-) 957 WP_096422372.1 competence protein CoiA Machinery gene
  STO1_RS05715 (STO1_011120) - 1133677..1134825 (-) 1149 WP_096422374.1 Card1-like endonuclease domain-containing protein -
  STO1_RS05720 (STO1_011130) tehB 1135003..1135863 (-) 861 WP_096422376.1 SAM-dependent methyltransferase TehB -
  STO1_RS05725 (STO1_011140) smpB 1135878..1136345 (-) 468 WP_084938555.1 SsrA-binding protein SmpB -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69873.75 Da        Isoelectric Point: 4.5813

>NTDB_id=69062 STO1_RS05705 WP_096422370.1 1130823..1132625(-) (pepF) [Streptococcus oralis subsp. tigurinus strain osk_001]
MVLQRHEINEKDTWDLSTIYPTDQAWEEALKDLTEKVQTASQYEGHLLDSADSLLEITEFSLDLERQVEKLYVYAHMKND
QDTREAKYQEYYAKAMTLYSQLEQAFSFYEPEFMEISEEQYEAFLEAQPKLQVYKHFFDKLSQKKDHVLSQREEELLAGA
GEIFGAASETFAILDNADITFPYVLDDEGKEVQLSHGTYIRLMESKNREVRRSAYEALYATYEQFQHTYAKTLQTNVKVQ
NYRAKVRNYKSARHAALAANFVPESVYDNLVAAVRKHLPLLHRYLELRSKILGISDLKMYDVYTPLSSVEYSFTYEEALK
KAEEALAVLGDDYLSRVKRAFSERWIDVYENQGKRSGAYSGGSYDTNAFMLLNWQDNLDNLFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVEDDATRFAILNNFLDGFRGTVFRQTQFAEFEHAIHQADQNGEVLTSDF
LNKLYADLNQEYYGLSKEDNPQIQYEWARIPHFYYNYYVYQYSTGFAAASALAEKIVHGSQEDRDRYIDYLKAGKSDYPL
NVMRKAGVDMEKEDYLNDAFAVFERRLNEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=69062 STO1_RS05705 WP_096422370.1 1130823..1132625(-) (pepF) [Streptococcus oralis subsp. tigurinus strain osk_001]
ATGGTATTACAACGACATGAAATAAATGAAAAAGATACATGGGATCTTTCAACAATCTACCCAACAGACCAGGCTTGGGA
AGAAGCCTTGAAAGATTTAACTGAAAAAGTACAAACAGCATCTCAGTATGAGGGGCATCTCTTGGATAGCGCAGACAGTT
TGCTTGAGATTACAGAATTCTCGCTTGACTTGGAACGCCAAGTTGAAAAGCTTTATGTCTATGCACATATGAAAAATGAC
CAGGACACGCGTGAAGCCAAGTATCAAGAGTACTATGCCAAGGCAATGACCCTATACAGTCAGTTAGAACAAGCATTTTC
ATTCTATGAACCTGAGTTTATGGAGATTAGTGAGGAGCAGTATGAGGCCTTCCTAGAAGCTCAACCAAAACTCCAAGTTT
ACAAGCACTTTTTTGACAAGCTCTCGCAAAAGAAAGACCATGTTCTTTCGCAACGTGAGGAAGAATTGCTTGCGGGAGCA
GGAGAAATCTTTGGCGCTGCTAGTGAAACCTTTGCTATTTTGGACAATGCGGATATCACCTTCCCATATGTCCTTGATGA
CGAAGGCAAGGAAGTGCAACTCTCACACGGCACTTATATCCGTTTGATGGAGTCTAAAAATCGTGAGGTGCGTCGTAGTG
CCTATGAAGCCCTCTATGCGACTTACGAGCAATTCCAACACACTTATGCTAAGACTTTGCAGACAAATGTCAAGGTGCAA
AACTACCGTGCCAAAGTTCGCAACTATAAGAGTGCTCGCCATGCAGCCCTCGCAGCAAACTTTGTCCCAGAGAGTGTCTA
TGACAATCTAGTAGCAGCAGTTCGCAAGCATTTGCCTCTCTTGCATCGTTACCTTGAACTTCGTTCTAAAATCTTGGGGA
TTTCAGATCTCAAGATGTATGATGTTTACACACCACTATCTTCAGTAGAATACAGCTTTACCTACGAAGAAGCCTTGAAA
AAGGCAGAAGAAGCCTTGGCAGTCTTGGGTGACGACTACTTGAGCCGTGTCAAACGTGCCTTTAGCGAGCGTTGGATTGA
TGTTTATGAAAACCAAGGCAAGCGTTCTGGTGCTTATTCTGGTGGTTCTTATGATACTAATGCCTTCATGCTTCTCAACT
GGCAGGATAACTTAGATAATCTCTTTACCCTTGTCCATGAGACAGGTCACAGTATGCACTCCAGCTATACTCGTGAAACC
CAACCTTATGTTTACGGAGATTACTCAATTTTCTTGGCTGAGATTGCCTCAACGACCAATGAAAATATCTTGACGGAGAA
ATTACTGGAAGAAGTAGAAGACGATGCGACGCGCTTTGCTATCCTCAATAACTTCTTGGACGGTTTCCGTGGAACGGTCT
TCCGCCAAACTCAATTCGCTGAGTTCGAACATGCCATTCACCAAGCAGACCAAAATGGAGAAGTCTTGACAAGTGATTTT
CTGAATAAACTCTACGCTGACTTGAACCAAGAGTACTATGGACTCAGCAAGGAAGACAATCCTCAAATCCAGTACGAATG
GGCACGCATTCCTCATTTCTACTATAACTACTATGTTTATCAGTATTCAACAGGTTTTGCAGCTGCTTCAGCCTTGGCTG
AGAAGATTGTCCATGGAAGTCAAGAAGACCGTGACCGCTATATCGACTACCTCAAGGCTGGTAAGTCTGACTATCCGCTT
AATGTTATGAGAAAAGCGGGAGTGGATATGGAGAAGGAAGACTATCTCAACGACGCCTTTGCAGTCTTTGAACGCCGTTT
AAATGAGTTTGAAGCCCTTGTTGAAAAATTGGGACTGGCTTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(112-181)

Peptidase family M3 (Peptidase_M3)

(202-581)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A224A7I6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

67.114

99.333

0.667

Multiple sequence alignment