Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   OTB22_RS01665 Genome accession   NZ_CP113267
Coordinates   318021..318731 (-) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain BC2     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 313021..323731
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OTB22_RS01650 (OTB22_01655) - 313720..313884 (+) 165 WP_268217996.1 hypothetical protein -
  OTB22_RS01655 (OTB22_01660) clpC 314140..316245 (+) 2106 WP_268217997.1 AAA family ATPase Regulator
  OTB22_RS01660 (OTB22_01665) - 316440..317786 (-) 1347 WP_268217916.1 IS1380-like element ISSpn5 family transposase -
  OTB22_RS01665 (OTB22_01670) treR 318021..318731 (-) 711 WP_000760673.1 trehalose operon repressor Regulator
  OTB22_RS01670 (OTB22_01675) treP 318916..320883 (+) 1968 WP_268217998.1 PTS system trehalose-specific EIIBC component -
  OTB22_RS01675 (OTB22_01680) treC 321061..322686 (+) 1626 WP_000171222.1 alpha,alpha-phosphotrehalase -
  OTB22_RS01680 (OTB22_01685) - 322942..323190 (+) 249 WP_000364990.1 YneF family protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=690608 OTB22_RS01665 WP_000760673.1 318021..318731(-) (treR) [Streptococcus pneumoniae strain BC2]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=690608 OTB22_RS01665 WP_000760673.1 318021..318731(-) (treR) [Streptococcus pneumoniae strain BC2]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACAGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593