Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   ORP33_RS09565 Genome accession   NZ_CP113256
Coordinates   1896349..1896966 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain K1     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1891349..1901966
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORP33_RS09540 (ORP33_09375) yndJ 1891678..1893318 (+) 1641 WP_213414515.1 YndJ family protein -
  ORP33_RS09545 (ORP33_09380) - 1893396..1893710 (+) 315 WP_201757448.1 hypothetical protein -
  ORP33_RS09550 (ORP33_09385) pghL 1893934..1894692 (+) 759 WP_213414516.1 poly-gamma-glutamate hydrolase family protein -
  ORP33_RS09555 (ORP33_09390) - 1894719..1895168 (-) 450 WP_014479935.1 YndM family protein -
  ORP33_RS09560 (ORP33_09395) fosB 1895377..1895810 (+) 434 Protein_1828 metallothiol transferase FosB -
  ORP33_RS09565 (ORP33_09400) dinR/lexA 1896349..1896966 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ORP33_RS09570 (ORP33_09405) yneA 1897116..1897433 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  ORP33_RS09575 (ORP33_09410) dinL 1897452..1898105 (+) 654 WP_213414517.1 YneB family resolvase-like protein -
  ORP33_RS09580 (ORP33_09415) ynzC 1898169..1898402 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ORP33_RS09585 (ORP33_09420) recP/tkt 1898571..1900574 (+) 2004 WP_014476936.1 transketolase Machinery gene
  ORP33_RS09590 (ORP33_09425) sirA 1900727..1901173 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ORP33_RS09595 (ORP33_09430) yneF 1901259..1901477 (+) 219 WP_003221221.1 YneF family protein -
  ORP33_RS09600 (ORP33_09435) ynzD 1901551..1901724 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=690404 ORP33_RS09565 WP_003238209.1 1896349..1896966(-) (dinR/lexA) [Bacillus subtilis strain K1]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=690404 ORP33_RS09565 WP_003238209.1 1896349..1896966(-) (dinR/lexA) [Bacillus subtilis strain K1]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTGCCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1