Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   STO1_RS01435 Genome accession   NZ_AP018338
Coordinates   274016..275785 (+) Length   589 a.a.
NCBI ID   WP_096421641.1    Uniprot ID   -
Organism   Streptococcus oralis subsp. tigurinus strain osk_001     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 269016..280785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STO1_RS01405 (STO1_002740) - 270326..270763 (+) 438 WP_007520708.1 PTS sugar transporter subunit IIA -
  STO1_RS01410 (STO1_002750) - 270807..271301 (+) 495 WP_004193690.1 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB -
  STO1_RS01415 (STO1_002760) - 271329..272174 (+) 846 WP_007520706.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
  STO1_RS01420 (STO1_002770) - 272158..273012 (+) 855 WP_025172565.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
  STO1_RS01425 (STO1_002780) - 273103..273393 (+) 291 WP_007520704.1 hypothetical protein -
  STO1_RS01430 (STO1_002790) - 273571..274032 (+) 462 WP_007520703.1 MarR family winged helix-turn-helix transcriptional regulator -
  STO1_RS01435 (STO1_002800) rcrP 274016..275785 (+) 1770 WP_096421641.1 ABC transporter ATP-binding protein Regulator
  STO1_RS01440 (STO1_002810) rcrQ 275775..277535 (+) 1761 WP_096421643.1 ABC transporter ATP-binding protein Regulator
  STO1_RS01445 (STO1_002820) - 277633..278136 (+) 504 WP_061588719.1 phosphatase PAP2 family protein -
  STO1_RS01450 (STO1_002830) - 278250..278696 (+) 447 WP_000776591.1 LytTR family DNA-binding domain-containing protein -
  STO1_RS01455 (STO1_002840) - 278702..279376 (+) 675 WP_045617716.1 LiaF transmembrane domain-containing protein -
  STO1_RS01460 (STO1_002850) rpmB 279483..279671 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  STO1_RS01465 (STO1_002860) - 279824..280189 (+) 366 WP_000216435.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65399.85 Da        Isoelectric Point: 6.2861

>NTDB_id=69039 STO1_RS01435 WP_096421641.1 274016..275785(+) (rcrP) [Streptococcus oralis subsp. tigurinus strain osk_001]
MKKLAKRITGKEWGMILLTVLFTCFSVYLELEVPTYISEITELIGTPGTELGQLWSPAAKMMGLSLLAFLSSVTVGFFAS
RVAASYTTHLRRDIFNRVLDFSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTVLITLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDKKFEEANDEVTRLNLFVNRLMAI
MNPIMMAISSGLTLAIYWIGAYIINDASLAERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
SSIENPSHAQTADPSVQGQVEFRDVTFRYSKNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSAGEILV
DGVNVQDYDLVDLRNKVGYIPQKAVLFSGDVKDNLDFGKSKETPLGEAAMWQALELAQSKNFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=69039 STO1_RS01435 WP_096421641.1 274016..275785(+) (rcrP) [Streptococcus oralis subsp. tigurinus strain osk_001]
ATGAAGAAACTTGCTAAACGTATTACAGGAAAAGAGTGGGGGATGATCCTACTCACTGTTCTTTTCACTTGTTTCTCGGT
CTATCTCGAGTTAGAAGTGCCGACCTATATTTCAGAAATAACAGAATTGATTGGAACACCGGGTACGGAGTTAGGACAAC
TATGGTCTCCTGCTGCTAAGATGATGGGCTTATCTCTCCTAGCCTTTCTGTCTTCTGTAACAGTTGGATTTTTTGCTTCT
CGTGTTGCAGCGTCTTACACGACTCACTTGCGAAGAGATATTTTTAATCGTGTTCTAGATTTTTCGCAAACGGAAATCAA
ACGTTTTTCAATCCCCAGTCTTTTGACTCGAACGACCAATGATATTACGCAGGTTCAGATGCTCTTTACTATGGGCTTAC
AGGTAGTGACTCGTGGGCCTATCATGGCCATCTGGGCCATTGGAAAAATCCTTGGGAAGTCGGAATACTGGCTCTGGGCA
GTAGTGGTGGCCGTCATTGTCAATGTCTTGATGACCACTGTTCTCATTACTCTAGCTTTTCCAAAACAATCTGTCATTCA
AAAATTGACAGATAAACTCAATAGCATCACTCGCGAAAGTTTGACTGGGATTCGGGTTGTTCGTGCTTATAATGCCGAGG
ATTACCAAGATAAGAAATTTGAAGAAGCCAATGATGAGGTGACTCGTCTCAATCTCTTTGTCAATCGATTGATGGCGATT
ATGAACCCTATTATGATGGCGATTTCCAGCGGTTTGACCTTAGCCATTTACTGGATTGGTGCCTATATCATCAACGATGC
AAGTTTGGCAGAACGTCTGCCACTCTTTAGTGATATGGTGGTCTTCATGTCCTATGCTATGCAGGTCGTGATGGGCTTCC
TTCTCATGGGAGCACTCTTTATCGTTCTTCCTCGTACCTTGGTTTCTGCAGGACGTATCAATCAAGTATTGGATTTGCAT
TCTTCTATTGAAAATCCTAGTCATGCACAGACAGCGGACCCTTCAGTTCAAGGACAAGTGGAATTTCGTGATGTGACTTT
CCGCTACTCTAAAAACTCTGAAGCAGTCGTGGAACATGTCACTTTCAAAGCAGAAGCGGGTCAAACTGTGGCCTTTATCG
GTTCAACTGGTTCTGGTAAATCTACTCTGGTCAACCTACTACCTCGTTTTTACGATGTATCCGCGGGAGAAATTCTAGTA
GATGGTGTTAATGTGCAAGATTACGACTTGGTAGACTTGCGCAATAAGGTTGGCTATATTCCGCAGAAAGCAGTCCTCTT
CTCAGGAGATGTTAAGGACAATCTAGATTTTGGTAAGAGCAAAGAAACTCCTCTAGGCGAAGCTGCTATGTGGCAAGCTC
TGGAATTAGCCCAGTCTAAAAACTTTATCGAGGATAAGGAAGCAGGTCTGGCCTCTGAAGTAGCCCAAGGCGGAACCAAC
TTCTCAGGAGGTCAAAGACAGCGTTTGGCCATTGCGCGTGCCTTGGCTCGTAAGCCAGAGATTCTTATCTTTGATGACTC
TTTCTCAGCCTTGGACTACAAGACAGACCGGATCTTGCGCCAAGAGCTAGCAGAGAAAACAAAATCTATGACCAAGCTCA
TCGTAGCACAGCGGATTTCTACCATCATGGATGCCGACCTGATCTTAGTATTGGATCAAGGTAAAGTCGTGGGGCAAGGC
ACCCACAAGGAACTTCTAGCTACCAATGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(56-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

66.057

100

0.674

Multiple sequence alignment