Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   STO1_RS01440 Genome accession   NZ_AP018338
Coordinates   275775..277535 (+) Length   586 a.a.
NCBI ID   WP_096421643.1    Uniprot ID   A0A224A3B8
Organism   Streptococcus oralis subsp. tigurinus strain osk_001     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 270775..282535
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STO1_RS01410 (STO1_002750) - 270807..271301 (+) 495 WP_004193690.1 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB -
  STO1_RS01415 (STO1_002760) - 271329..272174 (+) 846 WP_007520706.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
  STO1_RS01420 (STO1_002770) - 272158..273012 (+) 855 WP_025172565.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
  STO1_RS01425 (STO1_002780) - 273103..273393 (+) 291 WP_007520704.1 hypothetical protein -
  STO1_RS01430 (STO1_002790) - 273571..274032 (+) 462 WP_007520703.1 MarR family winged helix-turn-helix transcriptional regulator -
  STO1_RS01435 (STO1_002800) rcrP 274016..275785 (+) 1770 WP_096421641.1 ABC transporter ATP-binding protein Regulator
  STO1_RS01440 (STO1_002810) rcrQ 275775..277535 (+) 1761 WP_096421643.1 ABC transporter ATP-binding protein Regulator
  STO1_RS01445 (STO1_002820) - 277633..278136 (+) 504 WP_061588719.1 phosphatase PAP2 family protein -
  STO1_RS01450 (STO1_002830) - 278250..278696 (+) 447 WP_000776591.1 LytTR family DNA-binding domain-containing protein -
  STO1_RS01455 (STO1_002840) - 278702..279376 (+) 675 WP_045617716.1 LiaF transmembrane domain-containing protein -
  STO1_RS01460 (STO1_002850) rpmB 279483..279671 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  STO1_RS01465 (STO1_002860) - 279824..280189 (+) 366 WP_000216435.1 Asp23/Gls24 family envelope stress response protein -
  STO1_RS01470 (STO1_002870) - 280192..281859 (+) 1668 WP_061598053.1 DAK2 domain-containing protein -
  STO1_RS01475 (STO1_002880) - 281984..282190 (+) 207 WP_000390701.1 hypothetical protein -
  STO1_RS01480 (STO1_002890) - 282187..282381 (+) 195 WP_007520695.1 hypothetical protein -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64540.28 Da        Isoelectric Point: 5.5921

>NTDB_id=69040 STO1_RS01440 WP_096421643.1 275775..277535(+) (rcrQ) [Streptococcus oralis subsp. tigurinus strain osk_001]
MENKKMSFWKHSKPFLAGLQLPLLVAVVAAVCSSIITVYGPTKIKEITNLISDGLMTGIDLEAVSSIASFLVILYVLGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLVTM
FSMNWILALVTVVSTLVGFAAVSVIMAKSQGYFRAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKAKFAGLNQNLHDS
IWKSQFISGIMMPAMFFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMGRVFE
FLGEAEMQDESHKERQLTGMRGEVVFDRVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKNMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQTGISDERMMEASKAVGIHHFIMTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDEAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=69040 STO1_RS01440 WP_096421643.1 275775..277535(+) (rcrQ) [Streptococcus oralis subsp. tigurinus strain osk_001]
ATGGAAAATAAGAAAATGTCTTTTTGGAAACACTCTAAACCTTTTCTAGCAGGTCTCCAACTTCCCCTACTAGTAGCGGT
TGTAGCAGCTGTATGTTCAAGCATCATCACGGTTTATGGACCGACTAAGATAAAAGAAATCACCAACTTAATCTCAGATG
GTTTGATGACGGGAATTGACCTAGAGGCTGTTTCAAGTATTGCTAGCTTTTTAGTGATTCTCTATGTACTTGGTGCTATC
CTTAACTATACACAGGCCTATATCTTTTCAACAAGTATCCAACATTTTTCAAAACGCTTGCGGACGGCAATTGCTGAAAA
AATCAATCGTTTGCCCCTTGGCTATTTTGATCGTCATTCTCAAGGAGATACCCTTTCGCGCGTGACCAATGACGTTGATA
CGGCCGCTCAATCTCTCAATCAAAGTTTGGGAACAGTACTCTCAGCTAGCTTCTTGTTGATTGCTGTTTTGGTGACCATG
TTTAGCATGAACTGGATTTTAGCTCTGGTAACGGTTGTTTCTACGCTTGTTGGTTTTGCGGCAGTTTCCGTAATTATGGC
TAAGTCACAAGGGTACTTTAGAGCTCAGCAAAACAACTTGGCGGCTGTCAATGGTTATGTAGAAGAAATGTATTCGGGAC
ACAATGTTGTAACGAGCTACAACGCAGTAGACACCTCTAAAGCGAAATTTGCAGGTTTGAATCAGAACTTGCACGACAGC
ATCTGGAAATCTCAGTTTATCTCTGGTATCATGATGCCAGCCATGTTCTTTGTTGGGAATTTTAGCTATGTTTTGGTCAT
CATTGTTGGGGCCGCGCTTGCTCTAGAAGGGCATATCACTATAGGGATTATTGTAGCCTTTATGGTTTACGTACGGACCT
TCTCCCAACCCCTGTCACAGATTGCCCAAGGGATTACGAGCTTACAACAAGCGAGTGCAGCCATGGGACGTGTCTTTGAA
TTTCTAGGTGAAGCTGAGATGCAGGATGAATCCCATAAGGAAAGACAATTGACTGGCATGAGAGGAGAAGTGGTCTTTGA
TCGCGTATCCTTTGGTTATACACCAGAACGCACCATCATCCATGACTTTTCTGCGACAGCTCATGCAGGCCAGAAGGTCG
CTATCGTTGGGCCTACTGGAGCTGGTAAGACAACCATTGTCAATCTTTTGATGAAGTTCTATGAGATTGATAAGGGAAGT
ATCCGTATCGATGGAGTCGATACCAAGAATATGAAGCGCTCAGAAGTACATGATGCCTTTTCAATGGTCTTACAAGATAC
TTGGCTCTTTGAAGGAACCATTCGGGAAAATCTCATCTACAATCAGACAGGTATCAGCGATGAGCGGATGATGGAAGCCA
GCAAGGCTGTGGGAATTCACCACTTTATCATGACTTTGCCAGATGGCTACGATACTGTTTTGGATGACACTGTGACCTTG
TCTGTTGGACAGAAACAGCTTTTGACTATCGCTCGTGCTTTGTTGAAAGATGCACCGCTCTTGATTTTGGATGAAGCGAC
ATCCTCAGTTGACACACGTACAGAGGAATTGATTCAGAAAGCCATGGACCGTTTGATGGAAGGCAGAACTTCCTTTGTCA
TCGCCCATCGCTTGTCAACTATTCGTAATGCTGATTTGATTCTTGTTATGAAAGATGGTAATATTATTGAGCAAGGCAAT
CACGAGGAGCTGATGGCGCAAGGTGGCTTCTATGCGGATCTCTACAATAGTCAATTTACAGAAGACGAAGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(23-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A224A3B8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.61

99.659

0.664

Multiple sequence alignment