Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   M8286_RS07455 Genome accession   NZ_CP097577
Coordinates   1539258..1540307 (-) Length   349 a.a.
NCBI ID   WP_014638484.1    Uniprot ID   -
Organism   Streptococcus suis strain 3112     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1534258..1545307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8286_RS07435 (M8286_07555) trpB 1534767..1535963 (-) 1197 WP_275600805.1 tryptophan synthase subunit beta -
  M8286_RS07440 (M8286_07560) - 1536783..1537310 (-) 528 WP_358636164.1 VanZ family protein -
  M8286_RS07445 (M8286_07565) rlmN 1537307..1538419 (-) 1113 WP_275600806.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  M8286_RS07450 (M8286_07570) - 1538428..1539069 (-) 642 WP_358636166.1 YutD-like domain-containing protein -
  M8286_RS07455 (M8286_07575) sepM 1539258..1540307 (-) 1050 WP_014638484.1 SepM family pheromone-processing serine protease Regulator
  M8286_RS07460 (M8286_07580) coaD 1540294..1540782 (-) 489 WP_275600808.1 pantetheine-phosphate adenylyltransferase -
  M8286_RS07465 (M8286_07585) rsmD 1540772..1541311 (-) 540 WP_275600809.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  M8286_RS07470 (M8286_07590) - 1541619..1542341 (-) 723 WP_275600810.1 serine protease -
  M8286_RS07475 (M8286_07595) - 1542398..1542784 (-) 387 WP_275600811.1 rhodanese-like domain-containing protein -
  M8286_RS07480 (M8286_07600) - 1542784..1543002 (-) 219 WP_004194736.1 YqgQ family protein -
  M8286_RS07485 (M8286_07605) - 1543217..1543816 (-) 600 WP_358636172.1 response regulator transcription factor -
  M8286_RS07490 (M8286_07610) - 1543813..1544907 (-) 1095 WP_275600813.1 sensor histidine kinase -

Sequence


Protein


Download         Length: 349 a.a.        Molecular weight: 37719.70 Da        Isoelectric Point: 4.4261

>NTDB_id=690343 M8286_RS07455 WP_014638484.1 1539258..1540307(-) (sepM) [Streptococcus suis strain 3112]
MKKNRKLTLIASIVLGTLLIWFAVFVRLPYYLESPGGAADIRQVLTVNNQIDQEDGSYNFTYVSVQQATALQLFAAQFDP
YTTVRSSEEMTGGADNEEYFRIAQFYMETSQNMAKYQGLTLAGKEVNLDFFGVYVLALADDSTFKKVLNIADTVVSINGK
TFESSPDLIKYVSGLELGSDVTVGYISAGQEKSADGKIIKLSNGKNGIGITLVDHTEVQSSIPIDFQTGDIGGPSAGLMF
TLAIYTQLAEPDLRDGRIIAGTGTIEQDGKVGDIGGADKKVISAAKSGASIFFVPNNPVDVEVLKEDPKAKTNYEEAKEA
AEKAGLDIEVVPVKTVQEAIDYLKKTKGE

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=690343 M8286_RS07455 WP_014638484.1 1539258..1540307(-) (sepM) [Streptococcus suis strain 3112]
ATGAAGAAAAATAGGAAGTTAACCTTAATTGCATCTATTGTTTTAGGAACTCTTTTGATTTGGTTTGCCGTTTTTGTTCG
TCTGCCTTATTATTTGGAAAGTCCAGGTGGAGCTGCCGATATTCGTCAGGTACTAACGGTGAACAATCAAATAGACCAAG
AGGATGGCTCTTACAACTTCACCTATGTATCAGTCCAACAAGCTACAGCTTTACAACTATTCGCTGCTCAGTTTGATCCC
TATACGACAGTTCGTTCCTCTGAAGAGATGACAGGAGGGGCCGACAATGAAGAGTATTTCCGTATAGCACAGTTTTACAT
GGAGACATCGCAAAATATGGCGAAGTATCAAGGTTTGACCTTGGCAGGAAAAGAAGTCAATCTTGATTTCTTTGGTGTCT
ATGTACTTGCCTTGGCGGATGATTCGACCTTTAAAAAAGTTCTTAATATTGCCGACACTGTTGTGAGTATCAATGGAAAA
ACATTTGAGTCTTCTCCTGATTTGATTAAATATGTGAGTGGCTTGGAACTTGGAAGTGATGTAACAGTTGGTTATATTAG
CGCTGGTCAGGAAAAATCTGCGGACGGTAAGATTATCAAATTGTCTAATGGCAAAAACGGAATCGGCATCACTCTTGTAG
ACCATACAGAGGTTCAAAGTTCGATTCCGATTGATTTCCAAACGGGAGATATTGGTGGTCCAAGTGCTGGTCTGATGTTT
ACACTTGCCATCTATACTCAACTCGCAGAGCCTGACTTACGTGATGGTCGAATTATTGCTGGTACGGGGACTATCGAGCA
GGATGGAAAAGTAGGTGACATTGGTGGTGCTGATAAGAAGGTTATTTCGGCAGCTAAGTCAGGTGCAAGTATCTTTTTCG
TACCAAACAATCCAGTTGATGTGGAAGTTTTGAAGGAAGATCCAAAGGCTAAAACGAACTATGAAGAAGCTAAGGAAGCT
GCGGAGAAAGCAGGATTGGATATTGAGGTAGTTCCTGTGAAAACTGTTCAAGAGGCTATTGATTATTTGAAGAAAACAAA
GGGCGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

60.807

99.427

0.605