Detailed information NTG0690298

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: OUY06_RS06130
• Genome accession: NZ_CP113247
• Coordinates: 1216979..1218025 (-)
• Length: 348 a.a.
• NCBI ID: WP_035145546.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain CNSC001WB
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1211979..1223025

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OUY06_RS06105	rpsT	1212041..1212295 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
OUY06_RS06110	holA	1212363..1213391 (-)	1029	WP_025015735.1	DNA polymerase III subunit delta	-
OUY06_RS06115	comEC	1213388..1215454 (-)	2067	WP_231953244.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
OUY06_RS06120	-	1215652..1216140 (-)	489	WP_011374770.1	ComE operon protein 2	-
OUY06_RS06125	comEA	1216198..1216905 (-)	708	WP_226474265.1	helix-hairpin-helix domain-containing protein	Machinery gene
OUY06_RS06130	sepM	1216979..1218025 (-)	1047	WP_035145546.1	SepM family pheromone-processing serine protease	Regulator
OUY06_RS06135	coaD	1218027..1218524 (-)	498	WP_025015732.1	pantetheine-phosphate adenylyltransferase	-
OUY06_RS06140	rsmD	1218537..1219091 (-)	555	WP_016265217.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
OUY06_RS06145	-	1219096..1219386 (-)	291	WP_016265218.1	YlbG family protein	-
OUY06_RS06150	-	1219410..1220498 (-)	1089	WP_278319725.1	CAP-associated domain-containing protein	-
OUY06_RS06155	-	1220509..1221696 (-)	1188	WP_025015730.1	FtsW/RodA/SpoVE family cell cycle protein	-
OUY06_RS06160	-	1221705..1222001 (-)	297	WP_112206198.1	DUF1507 family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38125.90 Da
• Isoelectric Point: 9.5178

>NTDB_id=690298 OUY06_RS06130 WP_035145546.1 1216979..1218025(-) (sepM) [Latilactobacillus sakei strain CNSC001WB]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYHTKYLGVYVMSMLDNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLPGTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRKIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=690298 OUY06_RS06130 WP_035145546.1 1216979..1218025(-) (sepM) [Latilactobacillus sakei strain CNSC001WB]
ATGCCCAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCTGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACAGTTGGTGTCAGAGGCCCAGTAACACCATTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACCATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGACAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAGTTACCAGGCACGCATCATCCAGGTCTTGGGATTACGT
TAACCGATCACTCTAAGATTGAGACTGATATTCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTAAAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGCACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACCGTCT
TTTTTGCACCTAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
TCATTAA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (131-196)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (221-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	44.253	100	0.443