Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | SPYKS030_RS00695 | Genome accession | NZ_AP018337 |
| Coordinates | 105958..106911 (+) | Length | 317 a.a. |
| NCBI ID | WP_011054117.1 | Uniprot ID | A0A5S4TQH7 |
| Organism | Streptococcus pyogenes strain KS030 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 100958..111911
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPYKS030_RS00655 (SPYKS030_00800) | - | 101785..102150 (+) | 366 | WP_002986560.1 | DUF1033 family protein | - |
| SPYKS030_RS00660 (SPYKS030_00810) | comYA | 102243..103181 (+) | 939 | WP_011054114.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SPYKS030_RS00665 (SPYKS030_00820) | comYB | 103117..104151 (+) | 1035 | WP_011054115.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SPYKS030_RS00670 (SPYKS030_00830) | comYC | 104153..104479 (+) | 327 | WP_002986552.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SPYKS030_RS00675 (SPYKS030_00840) | comGD | 104454..104882 (+) | 429 | WP_002986548.1 | competence type IV pilus minor pilin ComGD | - |
| SPYKS030_RS00680 (SPYKS030_00850) | comGE | 104839..105123 (+) | 285 | WP_002987779.1 | competence type IV pilus minor pilin ComGE | - |
| SPYKS030_RS00685 (SPYKS030_00860) | comYF | 105116..105550 (+) | 435 | WP_032462142.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SPYKS030_RS00690 (SPYKS030_00870) | comGG | 105534..105860 (+) | 327 | WP_010921801.1 | competence type IV pilus minor pilin ComGG | - |
| SPYKS030_RS00695 (SPYKS030_00880) | comYH | 105958..106911 (+) | 954 | WP_011054117.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SPYKS030_RS00700 (SPYKS030_00890) | - | 106970..108166 (+) | 1197 | WP_010921803.1 | acetate kinase | - |
| SPYKS030_RS00705 (SPYKS030_00900) | - | 108352..108660 (+) | 309 | WP_011054118.1 | hypothetical protein | - |
| SPYKS030_RS00710 (SPYKS030_00910) | proC | 108743..109513 (-) | 771 | WP_002992745.1 | pyrroline-5-carboxylate reductase | - |
| SPYKS030_RS00715 (SPYKS030_00920) | pepA | 109561..110628 (-) | 1068 | WP_011054119.1 | glutamyl aminopeptidase | - |
| SPYKS030_RS00725 (SPYKS030_00940) | - | 111093..111377 (+) | 285 | WP_002992749.1 | DUF4651 domain-containing protein | - |
| SPYKS030_RS00730 (SPYKS030_00950) | - | 111374..111691 (+) | 318 | WP_002992751.1 | thioredoxin family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36027.22 Da Isoelectric Point: 4.7205
>NTDB_id=68971 SPYKS030_RS00695 WP_011054117.1 105958..106911(+) (comYH) [Streptococcus pyogenes strain KS030]
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALIMLPDSIFGHPSNAKSIIVLQKQIDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNSDKLKALCLTKEEWRKAYQFLFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLSASIAEIMDSS
AHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKVASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQ
SQLLKQWLKDYAQVVALIMLPDSIFGHPSNAKSIIVLQKQIDHPMETFVYPIRDLKLAENIHDFMENFKKWKLSNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=68971 SPYKS030_RS00695 WP_011054117.1 105958..106911(+) (comYH) [Streptococcus pyogenes strain KS030]
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGATACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCACTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTATGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAATAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
ATGACTTTTGAAAAAATTGAAGAAGCTTATCAGCTGCTCTTAGAGAACTGTCAACTAATTGAAAATGATCTAAAAACACA
TATATACGATGCCATTGTTGAACAAAACTCCTTTTATTTAGGGGCTGAGGGAGCTAGTCCTCAAGTTGCTCAAAATAGTG
ATAAACTGAAAGCCTTGTGCCTGACAAAAGAAGAATGGCGTAAGGCCTACCAGTTTCTTTTTATTAAGGCAGCTCAGACT
GAGCAACTCCAAGCCAACCATCAGTTCACACCAGATGCTATTGGCTTCATTCTGCTGTATCTTTTGGAACAATTGAGTGA
TAAAGATAGCTTAGAGGTACTTGAGATTGGAAGTGGAACAGGGAACCTAGCCCAAACCCTTCTCAACAACACGAGCAAGA
GCCTTGATTATGTAGGGATTGAACTTGATGATCTCTTGATTGATCTGTCAGCCAGTATTGCTGAGATAATGGATTCTTCA
GCTCATTTTATTCAAGAAGATGCGGTAAGGCCTCAATTACTAAAAGAAAGTGACATTGTCATCAGTGACTTACCAGTTGG
TTATTATCCTAACGATGATATTGCCAAACGATACAAGGTGGCTAGTTCAGATAAGCATACCTATGCCCATCACTTATTAA
TGGAACAGTCTTTAAAATACTTGAAAAAAGACGGTTTTGCGATTTTTCTGGCACCAGTCAATTTATTGACGAGCCCTCAG
AGCCAGTTATTGAAACAGTGGTTAAAAGATTATGCTCAGGTGGTGGCCTTGATTATGCTACCAGATTCTATTTTTGGTCA
TCCCTCAAATGCCAAGTCCATTATTGTCTTACAAAAACAAATAGACCACCCAATGGAAACCTTTGTCTATCCAATTCGGG
ATTTGAAGCTTGCAGAGAATATTCATGATTTTATGGAAAATTTCAAAAAATGGAAACTGAGTAATGTCAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
66.139 |
99.685 |
0.659 |
| comYH | Streptococcus mutans UA140 |
65.823 |
99.685 |
0.656 |