Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   M5E03_RS05505 Genome accession   NZ_CP097374
Coordinates   1080052..1081002 (+) Length   316 a.a.
NCBI ID   WP_041117046.1    Uniprot ID   -
Organism   Bacillus safensis strain AHB11     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1075052..1086002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5E03_RS05480 (M5E03_05480) comK 1075405..1075983 (+) 579 WP_034282183.1 competence protein ComK Regulator
  M5E03_RS05485 (M5E03_05485) - 1076282..1076764 (+) 483 WP_252050316.1 hypothetical protein -
  M5E03_RS05490 (M5E03_05490) - 1076796..1078235 (-) 1440 WP_252050317.1 PLP-dependent aminotransferase family protein -
  M5E03_RS05495 (M5E03_05495) - 1078381..1079550 (+) 1170 WP_252050318.1 MFS transporter -
  M5E03_RS05500 (M5E03_05500) - 1079616..1079891 (+) 276 WP_065214458.1 barstar family protein -
  M5E03_RS05505 (M5E03_05505) ceuB 1080052..1081002 (+) 951 WP_041117046.1 ABC transporter permease Machinery gene
  M5E03_RS05510 (M5E03_05510) - 1080995..1081945 (+) 951 WP_041117048.1 iron chelate uptake ABC transporter family permease subunit -
  M5E03_RS05515 (M5E03_05515) - 1081936..1082694 (+) 759 WP_252050319.1 ABC transporter ATP-binding protein -
  M5E03_RS05520 (M5E03_05520) - 1082717..1083661 (+) 945 WP_252050320.1 siderophore ABC transporter substrate-binding protein -
  M5E03_RS05525 (M5E03_05525) - 1083800..1084753 (+) 954 WP_034282168.1 LCP family protein -
  M5E03_RS05530 (M5E03_05530) - 1084822..1085184 (-) 363 WP_252050321.1 hypothetical protein -
  M5E03_RS05535 (M5E03_05535) - 1085305..1085958 (+) 654 WP_411243769.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34905.23 Da        Isoelectric Point: 9.6338

>NTDB_id=689243 M5E03_RS05505 WP_041117046.1 1080052..1081002(+) (ceuB) [Bacillus safensis strain AHB11]
MKLYQLSLLFVCLACISLFVGVQDLSILELFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=689243 M5E03_RS05505 WP_041117046.1 1080052..1081002(+) (ceuB) [Bacillus safensis strain AHB11]
ATGAAGTTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTAGAACTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TTGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGGAATCTTCTTTTCTTAAAAATCCTGCGGCATATCAAGGTGAATGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCTGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGGATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTTTCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GGCTCATGGTAGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491