Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   M5E02_RS15110 Genome accession   NZ_CP097373
Coordinates   2910176..2910316 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus safensis strain AHB2     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2905176..2915316
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5E02_RS15085 (M5E02_15085) - 2905441..2905830 (-) 390 WP_048237324.1 hotdog fold thioesterase -
  M5E02_RS15090 (M5E02_15090) comA 2905854..2906495 (-) 642 WP_252056613.1 response regulator transcription factor Regulator
  M5E02_RS15095 (M5E02_15095) comP 2906576..2908888 (-) 2313 WP_252056614.1 ATP-binding protein Regulator
  M5E02_RS15100 (M5E02_15100) comX 2908943..2909113 (-) 171 WP_165585047.1 competence pheromone ComX -
  M5E02_RS15105 (M5E02_15105) - 2909110..2910024 (-) 915 WP_252056615.1 polyprenyl synthetase family protein -
  M5E02_RS15110 (M5E02_15110) degQ 2910176..2910316 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  M5E02_RS15115 (M5E02_15115) - 2910822..2911178 (+) 357 WP_048654571.1 hypothetical protein -
  M5E02_RS15120 (M5E02_15120) - 2911212..2912438 (-) 1227 WP_048237328.1 HDOD domain-containing protein -
  M5E02_RS15125 (M5E02_15125) - 2912576..2914048 (-) 1473 WP_048237329.1 nicotinate phosphoribosyltransferase -
  M5E02_RS15130 (M5E02_15130) - 2914066..2914617 (-) 552 WP_234107346.1 isochorismatase family cysteine hydrolase -
  M5E02_RS15135 (M5E02_15135) - 2914678..2915085 (-) 408 WP_252056616.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=689219 M5E02_RS15110 WP_003213123.1 2910176..2910316(-) (degQ) [Bacillus safensis strain AHB2]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=689219 M5E02_RS15110 WP_003213123.1 2910176..2910316(-) (degQ) [Bacillus safensis strain AHB2]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAATTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696