Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   M5E02_RS11165 Genome accession   NZ_CP097373
Coordinates   2197447..2198250 (-) Length   267 a.a.
NCBI ID   WP_024422935.1    Uniprot ID   A0AAX0Z9Q1
Organism   Bacillus safensis strain AHB2     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2192447..2203250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5E02_RS11150 (M5E02_11150) - 2194650..2194886 (+) 237 WP_252056266.1 DUF2627 domain-containing protein -
  M5E02_RS11155 (M5E02_11155) - 2194923..2195660 (-) 738 WP_048239245.1 glycerophosphodiester phosphodiesterase -
  M5E02_RS11160 (M5E02_11160) - 2195889..2196989 (-) 1101 WP_252056267.1 Rap family tetratricopeptide repeat protein -
  M5E02_RS11165 (M5E02_11165) spo0A 2197447..2198250 (-) 804 WP_024422935.1 sporulation transcription factor Spo0A Regulator
  M5E02_RS11170 (M5E02_11170) spoIVB 2198536..2199813 (-) 1278 WP_048239243.1 SpoIVB peptidase -
  M5E02_RS11175 (M5E02_11175) recN 2200012..2201745 (-) 1734 WP_252056268.1 DNA repair protein RecN Machinery gene
  M5E02_RS11180 (M5E02_11180) argR 2201779..2202228 (-) 450 WP_024422938.1 transcriptional regulator ArgR -
  M5E02_RS11185 (M5E02_11185) - 2202394..2203248 (-) 855 WP_252056269.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29932.46 Da        Isoelectric Point: 6.3918

>NTDB_id=689203 M5E02_RS11165 WP_024422935.1 2197447..2198250(-) (spo0A) [Bacillus safensis strain AHB2]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVTHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=689203 M5E02_RS11165 WP_024422935.1 2197447..2198250(-) (spo0A) [Bacillus safensis strain AHB2]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAGCTTGTTGGCCTGTTGACAGAGTACATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGCCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTAGAACGCCTCCGTGAAAACAATGAAATGACGAAACAG
CCAAGTGTGATTATGCTAACGGCATTTGGACAAGAAGATGTCACGAAAAAAGCAGTTGATTTGGGCGCATCCTATTTCAT
TCTAAAGCCATTTGATATGGAAAACCTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTTACCCATCGCT
CTTCATCTATCCAAAACAGTGTTCTTCGTAACAAACCTGAACCGAAACGTAAAAACTTAGATGCGAGCATTACGACGATT
ATTCATGAGATTGGCGTGCCCGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCGATTTCTATGGTGTACAATGACAT
TGAGCTTCTCGGAAGCATCACTAAAGTGTTGTACCCAGACATTGCGAAGAAATTTAACACGACTGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGAAACATTGATTCCATTTCCTCACTCTTTGGTTATACTGTC
AGCATGTCAAAAGCGAAACCAACCAATTCAGAATTTATTGCCATGGTAGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884