Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | M5E02_RS00585 | Genome accession | NZ_CP097373 |
| Coordinates | 106683..109118 (+) | Length | 811 a.a. |
| NCBI ID | WP_048240170.1 | Uniprot ID | - |
| Organism | Bacillus safensis strain AHB2 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 101683..114118
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M5E02_RS00570 (M5E02_00570) | - | 104554..105018 (+) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
| M5E02_RS00575 (M5E02_00575) | - | 105033..105590 (+) | 558 | WP_070326871.1 | UvrB/UvrC motif-containing protein | - |
| M5E02_RS00580 (M5E02_00580) | - | 105595..106686 (+) | 1092 | WP_252057141.1 | protein arginine kinase | - |
| M5E02_RS00585 (M5E02_00585) | clpC | 106683..109118 (+) | 2436 | WP_048240170.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| M5E02_RS00590 (M5E02_00590) | radA | 109212..110591 (+) | 1380 | WP_252057142.1 | DNA repair protein RadA | Machinery gene |
| M5E02_RS00595 (M5E02_00595) | disA | 110594..111673 (+) | 1080 | WP_024425581.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| M5E02_RS00600 (M5E02_00600) | - | 111827..112927 (+) | 1101 | WP_048240173.1 | PIN/TRAM domain-containing protein | - |
| M5E02_RS00605 (M5E02_00605) | ispD | 112941..113630 (+) | 690 | WP_003217158.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| M5E02_RS00610 (M5E02_00610) | ispF | 113634..114110 (+) | 477 | WP_003216928.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 89995.73 Da Isoelectric Point: 6.2469
>NTDB_id=689175 M5E02_RS00585 WP_048240170.1 106683..109118(+) (clpC) [Bacillus safensis strain AHB2]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=689175 M5E02_RS00585 WP_048240170.1 106683..109118(+) (clpC) [Bacillus safensis strain AHB2]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAATATTGGTACTGAGCACATTTTACTTGGCCTTGTACGTGAAGGTGAGGGCATCGCTGCCAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGACGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGTGAGGGAGAGGGTGTCGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGAAGCAATGAAACAGGTGCATCTGCGGCAGGCTCTAATAGCAATGCAAAT
ACACCAACACTAGATAGCTTGGCAAGAGATTTGACAGCTATCGCAAAAGAGGACAGCTTGGACCCTGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTCCTAAGTAGAAGAACAAAAAATAACCCTGTGCTGATTGGTGAACCTGGTGTTG
GTAAAACAGCCATCGCAGAAGGTCTTGCACAGCAAATTATTCATAACGAAGTGCCTGAAATCCTGCGCGATAAACGAGTG
ATGACACTGGATATGGGAACAGTTGTAGCTGGTACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTGATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTTATCGATGAACTGCATACGCTCATTGGTGCTGGTGGAGCAGAGGGTG
CAATTGATGCATCTAATATCTTGAAGCCATCCTTAGCACGTGGAGAGCTTCAATGTATTGGAGCGACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCTATTCAAGTAGATCAGCCGTCTGTTGATGA
AAGTATTCAAATCTTAAGAGGACTTAGAGACCGGTACGAAGCACATCACCGTGTGTCTATTACAGATGAAGCGATTGAGG
CGGCAGTGAAGCTGTCTGACCGTTATATTTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCGTTCACAACACCGCCTAACCTAAAAGAACTAGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCGGCAGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTGACAAAGAAATCATGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATCGCAATGGTT
GTCTCTAGCTGGACGGGAGTACCAGTTTCGAAAATTGCTCAGACGGAAACAGATAAGCTTCTAAATATGGAACAATTGCT
CCACTCTCGTGTGATTGGGCAGGATGAAGCCGTTGTCGCTGTAGCAAAAGCGGTGAGACGTGCACGTGCTGGTCTGAAAG
ATCCGAAGCGTCCAATCGGCTCCTTTATCTTCTTAGGACCAACAGGGGTCGGTAAAACAGAGCTTGCAAGAGCACTCGCT
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGTATTGATATGTCTGAATACATGGAGAAACACTCTACATCCAGACT
TGTCGGATCACCTCCAGGCTATGTCGGCTATGATGAAGGTGGACAGCTGACTGAAAAAGTGAGAAGAAAACCTTATTCGG
TCGTTCTTTTAGACGAGATTGAAAAGGCGCATCCAGATGTATTTAATATCTTACTGCAAGTGTTAGAAGATGGTCGTCTG
ACTGATTCTAAAGGACGTACTGTTGACTTTAGAAATACGATTTTGATCATGACATCAAACGTTGGAGCTAGTGAGCTGAA
GCGTAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCTGAGTTTATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTTGAGAAGAAACATCTA
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACAAAACGATTAAAAGAACAAGACCTATCAATTGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTTGATCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TGGAAGATCGACTTTCTGAAGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAATATTGGTACTGAGCACATTTTACTTGGCCTTGTACGTGAAGGTGAGGGCATCGCTGCCAAAGCGTTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCAATGGACGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGTGAGGGAGAGGGTGTCGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTGCAGCTGCTTGGAAGCAATGAAACAGGTGCATCTGCGGCAGGCTCTAATAGCAATGCAAAT
ACACCAACACTAGATAGCTTGGCAAGAGATTTGACAGCTATCGCAAAAGAGGACAGCTTGGACCCTGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTCCTAAGTAGAAGAACAAAAAATAACCCTGTGCTGATTGGTGAACCTGGTGTTG
GTAAAACAGCCATCGCAGAAGGTCTTGCACAGCAAATTATTCATAACGAAGTGCCTGAAATCCTGCGCGATAAACGAGTG
ATGACACTGGATATGGGAACAGTTGTAGCTGGTACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTGATGGA
CGAAATTCGTCAGGCAGGAAATATCATTCTCTTTATCGATGAACTGCATACGCTCATTGGTGCTGGTGGAGCAGAGGGTG
CAATTGATGCATCTAATATCTTGAAGCCATCCTTAGCACGTGGAGAGCTTCAATGTATTGGAGCGACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCTGCGCTTGAACGACGTTTCCAGCCTATTCAAGTAGATCAGCCGTCTGTTGATGA
AAGTATTCAAATCTTAAGAGGACTTAGAGACCGGTACGAAGCACATCACCGTGTGTCTATTACAGATGAAGCGATTGAGG
CGGCAGTGAAGCTGTCTGACCGTTATATTTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTACGTTCGTTCACAACACCGCCTAACCTAAAAGAACTAGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCGGCAGTTCAAAGTCAAGAATTTGAAAAAGCAGCTTCTCTTCGCGATACAGAGCAGCGTTTGCGTGAAAAAG
TAGAAGTGACAAAGAAATCATGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATCGCAATGGTT
GTCTCTAGCTGGACGGGAGTACCAGTTTCGAAAATTGCTCAGACGGAAACAGATAAGCTTCTAAATATGGAACAATTGCT
CCACTCTCGTGTGATTGGGCAGGATGAAGCCGTTGTCGCTGTAGCAAAAGCGGTGAGACGTGCACGTGCTGGTCTGAAAG
ATCCGAAGCGTCCAATCGGCTCCTTTATCTTCTTAGGACCAACAGGGGTCGGTAAAACAGAGCTTGCAAGAGCACTCGCT
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGTATTGATATGTCTGAATACATGGAGAAACACTCTACATCCAGACT
TGTCGGATCACCTCCAGGCTATGTCGGCTATGATGAAGGTGGACAGCTGACTGAAAAAGTGAGAAGAAAACCTTATTCGG
TCGTTCTTTTAGACGAGATTGAAAAGGCGCATCCAGATGTATTTAATATCTTACTGCAAGTGTTAGAAGATGGTCGTCTG
ACTGATTCTAAAGGACGTACTGTTGACTTTAGAAATACGATTTTGATCATGACATCAAACGTTGGAGCTAGTGAGCTGAA
GCGTAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCTGAGTTTATCAACCGTATTGATGAAATCATTGTCTTCCACTCGCTTGAGAAGAAACATCTA
AAAGAGATCGTGTCTCTCATGTCTGATCAATTGACAAAACGATTAAAAGAACAAGACCTATCAATTGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTTGATCTTGAGTACGGTGCGCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TGGAAGATCGACTTTCTGAAGAGCTTCTGAAGGGCAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACGGCTGCTACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.054 |
100 |
0.961 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.368 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.005 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.556 |
100 |
0.45 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.229 |
87.916 |
0.433 |
| clpE | Streptococcus mutans UA159 |
53.478 |
79.778 |
0.427 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae Rx1 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae D39 |
52.868 |
79.531 |
0.42 |
| clpE | Streptococcus pneumoniae R6 |
52.868 |
79.531 |
0.42 |