Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   OS088_RS00280 Genome accession   NZ_CP113051
Coordinates   55706..56509 (+) Length   267 a.a.
NCBI ID   WP_001134193.1    Uniprot ID   -
Organism   Staphylococcus aureus strain Viktor     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 50706..61509
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS088_RS00260 - 52252..53589 (+) 1338 WP_154284164.1 aminotransferase class V-fold PLP-dependent enzyme -
  OS088_RS00265 tmk 53591..54208 (+) 618 WP_001272126.1 dTMP kinase -
  OS088_RS00270 - 54236..54565 (+) 330 WP_000781979.1 cyclic-di-AMP receptor -
  OS088_RS00275 - 54779..55705 (+) 927 WP_000344330.1 DNA polymerase III subunit delta' C-terminal domain-containing protein -
  OS088_RS00280 yaaT 55706..56509 (+) 804 WP_001134193.1 PSP1 domain-containing protein Regulator
  OS088_RS00285 yabA 56526..56873 (+) 348 WP_000375686.1 DNA replication initiation control protein YabA -
  OS088_RS00290 - 57147..57872 (+) 726 WP_154284165.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  OS088_RS00295 - 57865..58113 (+) 249 WP_000377064.1 GIY-YIG nuclease family protein -
  OS088_RS00300 rsmI 58115..58954 (+) 840 WP_000279926.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  OS088_RS00305 metG 59239..61212 (+) 1974 WP_001051123.1 methionine--tRNA ligase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30204.83 Da        Isoelectric Point: 4.5759

>NTDB_id=688495 OS088_RS00280 WP_001134193.1 55706..56509(+) (yaaT) [Staphylococcus aureus strain Viktor]
MPNVIGVQFQKAGKLEYYTPNDIQVDIDDWVVVESKRGIEIGIVKNPLMDIAEEDVVLPLKNIIRVADDKDIDKFNCNER
DAENALILCKDIVREQGLDMRLVNCEYTLDKSKVIFNFTADDRIDFRKLVKILAQHLKTRIELRQIGVRDEAKLLGGIGP
CGRSLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGACGRLMCCLKYENDYYEEVRAQLPDIGEAIETPDGNGKVVALNI
LDISMQVKLEGHEQPLEYKLEEIETMH

Nucleotide


Download         Length: 804 bp        

>NTDB_id=688495 OS088_RS00280 WP_001134193.1 55706..56509(+) (yaaT) [Staphylococcus aureus strain Viktor]
ATGCCAAATGTAATAGGTGTTCAGTTTCAAAAAGCGGGAAAATTAGAATATTATACACCTAATGATATACAAGTAGATAT
AGATGACTGGGTAGTTGTCGAATCTAAAAGAGGCATAGAGATAGGTATTGTTAAAAATCCATTAATGGATATTGCTGAAG
AGGATGTTGTGTTACCTCTTAAAAATATTATTCGCGTTGCTGATGACAAAGATATTGATAAATTTAATTGTAATGAACGA
GATGCTGAAAATGCATTAATACTATGTAAAGACATTGTAAGAGAACAAGGTTTGGACATGCGTTTAGTCAATTGCGAATA
TACATTAGATAAATCGAAAGTTATTTTTAATTTTACGGCGGATGATCGTATTGATTTTAGAAAATTAGTAAAAATATTAG
CACAACATTTAAAAACGCGTATCGAGTTGAGACAAATTGGTGTAAGAGATGAAGCCAAATTGCTTGGCGGTATCGGACCT
TGTGGTAGGTCGTTATGTTGTTCTACATTTTTAGGGGATTTTGAACCAGTATCGATTAAGATGGCTAAGGATCAAAATTT
ATCATTAAATCCAACTAAAATTTCCGGTGCATGTGGTCGTTTGATGTGTTGTTTAAAATATGAAAATGACTACTATGAGG
AAGTACGTGCACAATTACCTGATATCGGTGAAGCAATTGAAACGCCTGATGGTAACGGGAAAGTAGTTGCTTTAAATATA
TTAGACATTTCTATGCAGGTGAAGCTTGAGGGACATGAACAGCCACTTGAATATAAATTAGAAGAAATAGAAACTATGCA
TTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

63.118

98.502

0.622