Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   OS079_RS08105 Genome accession   NZ_CP113042
Coordinates   1612535..1613209 (+) Length   224 a.a.
NCBI ID   WP_001166505.1    Uniprot ID   Q2FIY0
Organism   Staphylococcus aureus strain Seraphine     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1607535..1618209
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS079_RS08080 - 1607750..1608817 (+) 1068 WP_000980137.1 membrane protein -
  OS079_RS08085 - 1608968..1610011 (+) 1044 WP_267830337.1 alpha/beta hydrolase -
  OS079_RS08090 - 1610340..1610768 (+) 429 WP_000198504.1 hypothetical protein -
  OS079_RS08095 - 1610977..1611483 (-) 507 WP_000940134.1 GNAT family N-acetyltransferase -
  OS079_RS08100 graX 1611596..1612519 (+) 924 WP_000802946.1 auxiliary protein GraX/ApsX -
  OS079_RS08105 braR 1612535..1613209 (+) 675 WP_001166505.1 response regulator transcription factor GraR/ApsR Regulator
  OS079_RS08110 graS 1613202..1614242 (+) 1041 WP_001061252.1 histidine kinase GraS/ApsS -
  OS079_RS08115 vraF 1614386..1615147 (+) 762 WP_267837891.1 ABC transporter ATP-binding protein VraF -
  OS079_RS08120 vraG 1615137..1617026 (+) 1890 WP_000143623.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26078.92 Da        Isoelectric Point: 4.3968

>NTDB_id=688166 OS079_RS08105 WP_001166505.1 1612535..1613209(+) (braR) [Staphylococcus aureus strain Seraphine]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=688166 OS079_RS08105 WP_001166505.1 1612535..1613209(+) (braR) [Staphylococcus aureus strain Seraphine]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTCCTGTCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATTAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2FIY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.909

98.214

0.402