Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   M3Y14_RS20940 Genome accession   NZ_CP097257
Coordinates   3975500..3976294 (-) Length   264 a.a.
NCBI ID   WP_002015081.1    Uniprot ID   R8I3Q7
Organism   Bacillus thuringiensis strain Bt Gxmzu777-1     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3970500..3981294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M3Y14_RS20915 (M3Y14_20845) yqiS 3970816..3971715 (-) 900 WP_219920089.1 phosphate butyryltransferase -
  M3Y14_RS20920 (M3Y14_20850) - 3971911..3973983 (-) 2073 WP_264539138.1 sigma-54 interaction domain-containing protein -
  M3Y14_RS20925 (M3Y14_20855) - 3974121..3974354 (+) 234 WP_219920094.1 DUF2627 domain-containing protein -
  M3Y14_RS20930 (M3Y14_20860) - 3974397..3975131 (-) 735 WP_215579625.1 glycerophosphodiester phosphodiesterase -
  M3Y14_RS20935 (M3Y14_20865) - 3975182..3975328 (+) 147 WP_001247671.1 YycC family protein -
  M3Y14_RS20940 (M3Y14_20870) spo0A 3975500..3976294 (-) 795 WP_002015081.1 sporulation transcription factor Spo0A Regulator
  M3Y14_RS20945 (M3Y14_20875) spoIVB 3976581..3977873 (-) 1293 WP_219920121.1 SpoIVB peptidase -
  M3Y14_RS20950 (M3Y14_20880) recN 3977993..3979732 (-) 1740 WP_219920123.1 DNA repair protein RecN Machinery gene
  M3Y14_RS20955 (M3Y14_20885) argR 3980003..3980452 (-) 450 WP_002015076.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29525.32 Da        Isoelectric Point: 7.1180

>NTDB_id=688166 M3Y14_RS20940 WP_002015081.1 3975500..3976294(-) (spo0A) [Bacillus thuringiensis strain Bt Gxmzu777-1]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGIAYNGQECLNLLKEKQPDILVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKESATIKRPLPSFRSATTIDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=688166 M3Y14_RS20940 WP_002015081.1 3975500..3976294(-) (spo0A) [Bacillus thuringiensis strain Bt Gxmzu777-1]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTGGTATCGATGCTAGAGAGCTATGTTGCTGCCCAAGA
TGATATGGAAGTTATCGGAATTGCTTACAATGGTCAAGAATGTTTAAACTTATTGAAAGAGAAGCAGCCTGATATACTCG
TTTTGGACATTATTATGCCACATTTAGATGGTCTAGCTGTGCTAGAGAAAATGCGACATATTGAAAGGTTAAGACAACCT
AGCGTTATTATGTTGACAGCATTCGGACAAGAAGATGTGACGAAAAAAGCGGTTGATTTAGGGGCATCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACAAGTCATATTCGTCAAGTTAGTGGTAAGGAAAGTGCTACTATTAAACGTCCAT
TACCATCTTTCCGATCAGCAACAACGATCGATGGAAAACCGAAAAACTTAGATGCGAGTATTACAAGTATCATTCATGAA
ATTGGTGTACCCGCTCATATTAAAGGGTACATGTACTTACGAGAAGCAATCTCTATGGTGTACAATGATATCGAATTACT
AGGGTCTATTACTAAAGTATTATATCCAGATATCGCAAAGAAATATAATACAACAGCAAGTCGTGTTGAGCGCGCAATCC
GTCACGCAATTGAAGTAGCTTGGAGCCGTGGGAATATTGATTCTATTTCGTCCTTATTTGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAATTCCGAGTTCATCGCAATGGTTGCGGATAAGCTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB R8I3Q7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818