Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   OS086_RS12240 Genome accession   NZ_CP113039
Coordinates   2420268..2421554 (+) Length   428 a.a.
NCBI ID   WP_000121119.1    Uniprot ID   P63332
Organism   Staphylococcus aureus strain Gwen     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2415268..2426554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OS086_RS12210 - 2415663..2415776 (+) 114 WP_001789890.1 hypothetical protein -
  OS086_RS12215 tsf 2415811..2416692 (+) 882 WP_000201392.1 translation elongation factor Ts -
  OS086_RS12220 pyrH 2416829..2417551 (+) 723 WP_000057330.1 UMP kinase -
  OS086_RS12225 frr 2417570..2418124 (+) 555 WP_001280006.1 ribosome recycling factor -
  OS086_RS12230 - 2418497..2419267 (+) 771 WP_000473699.1 isoprenyl transferase -
  OS086_RS12235 - 2419274..2420056 (+) 783 WP_000868413.1 phosphatidate cytidylyltransferase -
  OS086_RS12240 eeP 2420268..2421554 (+) 1287 WP_000121119.1 RIP metalloprotease RseP Regulator
  OS086_RS12245 - 2421574..2423277 (+) 1704 WP_000814094.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 48116.47 Da        Isoelectric Point: 9.4373

>NTDB_id=688112 OS086_RS12240 WP_000121119.1 2420268..2421554(+) (eeP) [Staphylococcus aureus strain Gwen]
MSYLVTIIAFIIVFGVLVTVHEYGHMFFAKRAGIMCPEFAIGMGPKIFSFRKNETLYTIRLLPVGGYVRMAGDGLEEPPV
EPGMNVKIKLNEENEITHIILDDHHKFQQIEAIEVKKCDFKDDLFIEGITAYDNERHHFKIARKSFFVENGSLVQIAPRD
RQFAHKKPWPKFLTLFAGPLFNFILALVLFIGLAYYQGTPTSTVEQVADKYPAQQAGLQKGDKIVQIGKYKISEFDDVDK
ALDKVKDNKTTVKFERDGKTKSVELTPKKTERKLTKVSSETKYVLGFQPASEHTLFKPIVYGFESFLKGSTLIFTAVVGM
LASIFTGGFSFDMLNGPVGIYHNVDSVVKAGIISLIGYTALLSVNLGIMNLIPIPALDGGRILFVIYEAIFRKPVNKKAE
TTIIAIGAIFMVVIMILVTWNDIRRYFL

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=688112 OS086_RS12240 WP_000121119.1 2420268..2421554(+) (eeP) [Staphylococcus aureus strain Gwen]
GTGAGCTATTTAGTTACAATAATTGCATTTATTATTGTTTTTGGTGTACTAGTAACTGTTCATGAATATGGACATATGTT
TTTTGCGAAAAGAGCAGGCATTATGTGTCCAGAATTTGCGATCGGTATGGGGCCAAAAATTTTTAGTTTTAGAAAAAATG
AAACACTTTACACTATTAGGTTATTGCCTGTTGGTGGATATGTTCGTATGGCAGGAGATGGCTTAGAAGAGCCACCAGTC
GAGCCCGGTATGAACGTTAAAATTAAACTGAATGAAGAAAATGAAATAACACATATCATATTAGATGATCATCATAAGTT
TCAACAAATTGAAGCGATCGAAGTTAAAAAATGTGATTTTAAGGATGACTTATTCATAGAAGGTATCACTGCTTATGATA
ATGAAAGACATCATTTTAAAATTGCTAGAAAGTCTTTCTTTGTTGAAAATGGTAGCTTAGTTCAAATTGCTCCGAGAGAC
AGACAATTTGCACATAAAAAGCCATGGCCGAAATTTTTAACATTATTTGCGGGACCGTTATTTAACTTTATATTAGCTTT
AGTCCTATTTATTGGTCTTGCATATTATCAAGGTACACCTACGTCTACTGTAGAACAAGTCGCAGATAAGTATCCAGCTC
AACAAGCAGGATTACAAAAAGGTGATAAAATTGTTCAAATTGGCAAATATAAAATATCTGAATTTGATGATGTTGATAAG
GCGTTAGATAAAGTTAAAGATAATAAGACGACTGTTAAATTTGAACGTGATGGTAAAACGAAGTCAGTTGAATTAACACC
TAAAAAGACTGAAAGAAAACTGACTAAAGTAAGTTCAGAGACGAAGTATGTTCTCGGATTCCAACCAGCGAGTGAACATA
CACTTTTCAAACCAATTGTATATGGATTTGAAAGCTTTTTGAAAGGTAGTACACTAATTTTTACAGCTGTAGTCGGTATG
TTGGCTAGTATATTTACGGGCGGATTCTCATTTGATATGTTAAATGGTCCGGTTGGTATTTATCATAACGTCGACTCAGT
TGTTAAAGCGGGTATCATTAGCTTAATTGGTTACACTGCGTTATTAAGTGTAAACTTAGGTATTATGAATTTAATTCCTA
TTCCTGCACTAGACGGTGGTCGTATTTTATTTGTTATATATGAAGCGATTTTCAGAAAACCAGTTAATAAAAAAGCGGAA
ACAACGATTATTGCTATTGGTGCCATTTTCATGGTCGTTATTATGATATTAGTAACGTGGAATGATATTCGACGATATTT
CTTATAA

Domains

Predicted by InterProScan.

PDZ domain (PDZ_2)

(191-265)

Peptidase family M50 (Peptidase_M50)

(9-413)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P63332

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.675

100

0.4
  eeP Streptococcus thermophilus LMG 18311

39.12

100

0.395