Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   M2893_RS16265 Genome accession   NZ_CP097208
Coordinates   3252699..3255005 (-) Length   768 a.a.
NCBI ID   WP_249485065.1    Uniprot ID   -
Organism   Bacillus velezensis strain N3     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3247699..3260005
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2893_RS16225 (M2893_16225) - 3248159..3248590 (+) 432 WP_003152066.1 Na(+)/H(+) antiporter subunit B -
  M2893_RS16230 (M2893_16230) - 3248590..3248931 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  M2893_RS16235 (M2893_16235) - 3248924..3250405 (+) 1482 WP_043867375.1 Na+/H+ antiporter subunit D -
  M2893_RS16240 (M2893_16240) - 3250411..3250887 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  M2893_RS16245 (M2893_16245) - 3250887..3251171 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  M2893_RS16250 (M2893_16250) mnhG 3251155..3251529 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  M2893_RS16255 (M2893_16255) - 3251569..3251952 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  M2893_RS16260 (M2893_16260) comA 3251974..3252618 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  M2893_RS16265 (M2893_16265) comP 3252699..3255005 (-) 2307 WP_249485065.1 sensor histidine kinase Regulator
  M2893_RS16270 (M2893_16270) comX 3255024..3255200 (-) 177 WP_044052947.1 competence pheromone ComX -
  M2893_RS16275 (M2893_16275) - 3255215..3256111 (-) 897 WP_017419425.1 polyprenyl synthetase family protein -
  M2893_RS16280 (M2893_16280) degQ 3256242..3256382 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  M2893_RS16285 (M2893_16285) - 3256848..3257189 (+) 342 WP_014305721.1 hypothetical protein -
  M2893_RS16290 (M2893_16290) - 3257196..3258416 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 89230.45 Da        Isoelectric Point: 8.3570

>NTDB_id=687800 M2893_RS16265 WP_249485065.1 3252699..3255005(-) (comP) [Bacillus velezensis strain N3]
MKKFIRNFSIVLLFVSLFYVAHIIYFTQNGILVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKTPTEENI
RGQYLAKAEHMKIIRGNSKIDLHNTEFISLNSSYSFFIYIIPCILFALSMLCIFYIYKVNRVKDTYSAFILIIFLLCTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYFHFLYQYFKELKLKFSAGYVVSTLYILPVINIIIEIFQKHFAFQLVTNIN
LVTFFLEMMVVYTSIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGQYIYSAIVTAPFLIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIIPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIFKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEISSDGDILYFDKQNSEPNWQPYKKEFVKVSSEIGKIF
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSTGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=687800 M2893_RS16265 WP_249485065.1 3252699..3255005(-) (comP) [Bacillus velezensis strain N3]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTCGCTCATATTATATATTTTAC
TCAAAACGGAATTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTGCAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAACACCGACAGAAGAGAATATA
AGAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATAATAAGGGGTAATAGTAAAATAGACTTACATAATACTGAGTT
TATTTCCTTAAATAGCTCTTATAGTTTTTTTATCTATATTATCCCATGCATATTATTTGCTTTAAGCATGTTATGCATTT
TTTATATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTTTATTTTGATTATTTTTTTATTGTGTACATCCATT
GCATATTTAAGCGCAGGTGGAGTAACTAGAGGATATGAAATAAACAGATATATTAACCTTTTTACATTTTTGAACGTACC
TGTATTATACTTTCACTTTTTGTATCAATACTTTAAAGAATTAAAATTGAAATTTTCAGCTGGTTATGTTGTGTCTACTC
TCTATATATTGCCGGTTATTAATATAATAATCGAGATATTCCAGAAGCATTTTGCCTTCCAACTTGTTACGAATATTAAT
TTAGTAACATTTTTTTTGGAAATGATGGTCGTCTATACATCCATTATTTTTTATGGACTAGTCTACCGAAAAAAGGATCA
CTTTTATTTGCTGAAAGTATTACTTATATCTAATACCATAGCCTTTTTTCCGTTTACAGTATTTTATATTATACCTGAGG
TGTTGTTCGGACAGTATATTTATTCTGCTATAGTTACGGCACCATTTTTAATAATTATTCCATTAGCTTTAGTCTATCAA
TTCGTGGTCAATAAAATCTACGATATAGACTTCTTGTTGGGCAGAATTAGATACTATGGTTTCCTTTCCATTATTCCGAC
TATTGGAGTTGTATGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTTCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATATTTAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAACCAAGTGTTTATGAATCTTAA
AAAGACGATATTAGATGTGTTGCCTGTCAGTAAGGCATATATCTTTGAAATCAGTTCTGACGGAGATATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGTTAAAGTCTCATCAGAGATTGGCAAGATTTTT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCGAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGATTTGATTTCTTTGAA
GCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAAGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGCTGCAATCAGGAAGAAGGCGGCGGACAGTCGATGAGCACGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(568-637)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.014

100

0.592