Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   M2M89_RS06020 Genome accession   NZ_CP097130
Coordinates   1175822..1176775 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus subtilis strain S16     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1170822..1181775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2M89_RS05995 argF 1172653..1173612 (+) 960 WP_046160277.1 ornithine carbamoyltransferase -
  M2M89_RS06000 yjzC 1173698..1173877 (+) 180 WP_003245356.1 YjzC family protein -
  M2M89_RS06005 yjzD 1173923..1174108 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  M2M89_RS06010 - 1174358..1175092 (+) 735 WP_041850982.1 hypothetical protein -
  M2M89_RS06015 - 1175174..1175731 (+) 558 WP_014476424.1 hypothetical protein -
  M2M89_RS06020 med 1175822..1176775 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  M2M89_RS06025 comZ 1176790..1176981 (+) 192 WP_072175657.1 ComG operon transcriptional repressor ComZ Regulator
  M2M89_RS06030 yjzB 1177011..1177238 (-) 228 WP_121591633.1 spore coat protein YjzB -
  M2M89_RS06035 fabH 1177403..1178341 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  M2M89_RS06040 fabF 1178364..1179605 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  M2M89_RS06045 yjaZ 1179681..1180466 (+) 786 WP_021479557.1 DUF2268 domain-containing protein -
  M2M89_RS06050 appD 1180658..1181644 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=687412 M2M89_RS06020 WP_014476425.1 1175822..1176775(+) (med) [Bacillus subtilis strain S16]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=687412 M2M89_RS06020 WP_014476425.1 1175822..1176775(+) (med) [Bacillus subtilis strain S16]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTATTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGAGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAACAAAGG
CACCCTTGAGGGCGGCGACCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGGACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCTAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997