Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   M2M89_RS06025 Genome accession   NZ_CP097130
Coordinates   1176790..1176981 (+) Length   63 a.a.
NCBI ID   WP_072175657.1    Uniprot ID   -
Organism   Bacillus subtilis strain S16     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1171790..1181981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2M89_RS05995 argF 1172653..1173612 (+) 960 WP_046160277.1 ornithine carbamoyltransferase -
  M2M89_RS06000 yjzC 1173698..1173877 (+) 180 WP_003245356.1 YjzC family protein -
  M2M89_RS06005 yjzD 1173923..1174108 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  M2M89_RS06010 - 1174358..1175092 (+) 735 WP_041850982.1 hypothetical protein -
  M2M89_RS06015 - 1175174..1175731 (+) 558 WP_014476424.1 hypothetical protein -
  M2M89_RS06020 med 1175822..1176775 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  M2M89_RS06025 comZ 1176790..1176981 (+) 192 WP_072175657.1 ComG operon transcriptional repressor ComZ Regulator
  M2M89_RS06030 yjzB 1177011..1177238 (-) 228 WP_121591633.1 spore coat protein YjzB -
  M2M89_RS06035 fabH 1177403..1178341 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  M2M89_RS06040 fabF 1178364..1179605 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  M2M89_RS06045 yjaZ 1179681..1180466 (+) 786 WP_021479557.1 DUF2268 domain-containing protein -
  M2M89_RS06050 appD 1180658..1181644 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7248.29 Da        Isoelectric Point: 4.2564

>NTDB_id=687413 M2M89_RS06025 WP_072175657.1 1176790..1176981(+) (comZ) [Bacillus subtilis strain S16]
MQHEKSLEFLQIAMKYFPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=687413 M2M89_RS06025 WP_072175657.1 1176790..1176981(+) (comZ) [Bacillus subtilis strain S16]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

98.413

100

0.984