Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   ORF34_RS09760 Genome accession   NZ_CP112873
Coordinates   1921670..1923673 (+) Length   667 a.a.
NCBI ID   WP_003245397.1    Uniprot ID   P45694
Organism   Bacillus subtilis strain O4     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1916670..1928673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORF34_RS09720 (ORF34_09720) pghL 1917030..1917788 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  ORF34_RS09725 (ORF34_09725) - 1917815..1918264 (-) 450 WP_003245454.1 YndM family protein -
  ORF34_RS09730 (ORF34_09730) fosM 1918472..1918906 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  ORF34_RS09735 (ORF34_09735) - 1918815..1919111 (+) 297 WP_223257629.1 hypothetical protein -
  ORF34_RS09740 (ORF34_09740) dinR/lexA 1919448..1920065 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ORF34_RS09745 (ORF34_09745) yneA 1920215..1920532 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ORF34_RS09750 (ORF34_09750) dinL 1920551..1921204 (+) 654 WP_003231596.1 recombinase family protein -
  ORF34_RS09755 (ORF34_09755) ynzC 1921268..1921501 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ORF34_RS09760 (ORF34_09760) recP/tkt 1921670..1923673 (+) 2004 WP_003245397.1 transketolase Machinery gene
  ORF34_RS09765 (ORF34_09765) sirA 1923826..1924272 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ORF34_RS09770 (ORF34_09770) yneF 1924358..1924576 (+) 219 WP_003221221.1 YneF family protein -
  ORF34_RS09775 (ORF34_09775) ynzD 1924650..1924823 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  ORF34_RS09780 (ORF34_09780) ccdA 1925043..1925750 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  ORF34_RS09785 (ORF34_09785) yneI 1925839..1926201 (+) 363 WP_003245707.1 response regulator -
  ORF34_RS09790 (ORF34_09790) yneJ 1926280..1926771 (+) 492 WP_010886519.1 CcdC family protein -
  ORF34_RS09795 (ORF34_09795) yneK 1926802..1927230 (-) 429 WP_003231580.1 DynA interaction protein YneK -
  ORF34_RS09800 (ORF34_09800) cotM 1927464..1927856 (-) 393 WP_010886520.1 outer spore coat protein CotM -
  ORF34_RS09805 (ORF34_09805) sspP 1927937..1928083 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  ORF34_RS09810 (ORF34_09810) sspO 1928115..1928261 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72344.44 Da        Isoelectric Point: 4.7291

>NTDB_id=686987 ORF34_RS09760 WP_003245397.1 1921670..1923673(+) (recP/tkt) [Bacillus subtilis strain O4]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAVAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
SGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTSEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=686987 ORF34_RS09760 WP_003245397.1 1921670..1923673(+) (recP/tkt) [Bacillus subtilis strain O4]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAAGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGTAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGTTTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
TCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCGGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACATCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACGGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCTGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P45694

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562