Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   ORF34_RS09740 Genome accession   NZ_CP112873
Coordinates   1919448..1920065 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain O4     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1914448..1925065
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ORF34_RS09710 (ORF34_09710) yndJ 1914762..1916402 (+) 1641 WP_003231612.1 YndJ family protein -
  ORF34_RS09715 (ORF34_09715) - 1916490..1916804 (+) 315 WP_003245621.1 hypothetical protein -
  ORF34_RS09720 (ORF34_09720) pghL 1917030..1917788 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  ORF34_RS09725 (ORF34_09725) - 1917815..1918264 (-) 450 WP_003245454.1 YndM family protein -
  ORF34_RS09730 (ORF34_09730) fosM 1918472..1918906 (+) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  ORF34_RS09735 (ORF34_09735) - 1918815..1919111 (+) 297 WP_223257629.1 hypothetical protein -
  ORF34_RS09740 (ORF34_09740) dinR/lexA 1919448..1920065 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  ORF34_RS09745 (ORF34_09745) yneA 1920215..1920532 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  ORF34_RS09750 (ORF34_09750) dinL 1920551..1921204 (+) 654 WP_003231596.1 recombinase family protein -
  ORF34_RS09755 (ORF34_09755) ynzC 1921268..1921501 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  ORF34_RS09760 (ORF34_09760) recP/tkt 1921670..1923673 (+) 2004 WP_003245397.1 transketolase Machinery gene
  ORF34_RS09765 (ORF34_09765) sirA 1923826..1924272 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  ORF34_RS09770 (ORF34_09770) yneF 1924358..1924576 (+) 219 WP_003221221.1 YneF family protein -
  ORF34_RS09775 (ORF34_09775) ynzD 1924650..1924823 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=686986 ORF34_RS09740 WP_003238209.1 1919448..1920065(-) (dinR/lexA) [Bacillus subtilis strain O4]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=686986 ORF34_RS09740 WP_003238209.1 1919448..1920065(-) (dinR/lexA) [Bacillus subtilis strain O4]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGTTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1