Detailed information NTG0686129

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ORI86_RS21630
• Genome accession: NZ_CP111004
• Coordinates: 4440643..4441668 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain J53-p131
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4435643..4446668

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ORI86_RS21610 (ORI86_21610)	metJ	4436704..4437021 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ORI86_RS21615 (ORI86_21615)	yiiX	4437205..4437813 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ORI86_RS21620 (ORI86_21620)	rpmE	4437874..4438086 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ORI86_RS21625 (ORI86_21625)	priA	4438289..4440487 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
ORI86_RS21630 (ORI86_21630)	cytR	4440643..4441668 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ORI86_RS21635 (ORI86_21635)	ftsN	4441760..4442719 (+)	960	WP_000068828.1	cell division protein FtsN	-
ORI86_RS21640 (ORI86_21640)	hslV	4442812..4443342 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ORI86_RS21645 (ORI86_21645)	hslU	4443352..4444683 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ORI86_RS21650 (ORI86_21650)	menA	4444750..4445676 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ORI86_RS21655 (ORI86_21655)	rraA	4445769..4446254 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ORI86_RS21660 (ORI86_21660)	zapB	4446339..4446584 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=686129 ORI86_RS21630 WP_000644904.1 4440643..4441668(+) (cytR) [Escherichia coli strain J53-p131]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=686129 ORI86_RS21630 WP_000644904.1 4440643..4441668(+) (cytR) [Escherichia coli strain J53-p131]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628