Detailed information NTG0685217

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: OOL18_RS04485
• Genome accession: NZ_CP110664
• Coordinates: 944935..947763 (-)
• Length: 942 a.a.
• NCBI ID: WP_265411072.1
• Uniprot ID: -
• Organism: Actinobacillus pleuropneumoniae strain AP_123
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 939935..952763

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OOL18_RS04465	-	941418..942104 (-)	687	WP_005601038.1	CidB/LrgB family autolysis modulator	-
OOL18_RS04470	-	942114..942473 (-)	360	WP_005601040.1	CidA/LrgA family protein	-
OOL18_RS04475	-	942540..944462 (-)	1923	WP_265411071.1	ATP-dependent DNA helicase	-
OOL18_RS04480	-	944584..944796 (+)	213	WP_005597221.1	hypothetical protein	-
OOL18_RS04485	uvrA	944935..947763 (-)	2829	WP_265411072.1	excinuclease ABC subunit UvrA	Machinery gene
OOL18_RS04490	ssb	947914..948438 (+)	525	WP_039195080.1	single-stranded DNA-binding protein	Machinery gene
OOL18_RS04495	-	948648..949547 (-)	900	WP_039709098.1	LysR family transcriptional regulator	-
OOL18_RS04500	-	949659..950648 (+)	990	WP_265411073.1	zinc-dependent alcohol dehydrogenase family protein	-
OOL18_RS04505	-	950731..951129 (-)	399	WP_010907411.1	Cd(II)/Pb(II)-responsive transcriptional regulator	-
OOL18_RS04510	-	951202..951816 (+)	615	WP_010907412.1	cation diffusion facilitator family transporter	-

Sequence

Protein

• Length: 942 a.a.
• Molecular weight: 104371.80 Da
• Isoelectric Point: 6.5118

>NTDB_id=685217 OOL18_RS04485 WP_265411072.1 944935..947763(-) (uvrA) [Actinobacillus pleuropneumoniae strain AP_123]
MQYIDVRGARTHNLKNINLILPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRCPDHDLPLAAQTISQMVDRVMEEPEGKRLMLLAPVVKNRKG
EHVKLLENLTASGYIRARIDGEICDLSDPPTLELQKKHTIEVVVDRFKVRSDIATRLAESFETALDLSGSTAIIADMDDP
NAEEIVFSSSFACPHCGYSLHELEPRLFSFNNPAGACPTCDGLGVEQYFDPNKVVQNPDVSLASGAIKGWDRRSFYYFGL
LKSVADHYDFSLDTPFKDLTKKQRDIILNGSKDEIEFVYVNDRGDKVKRKHTFEGVLNNMARRYKETESNSVREELAKYI
NSRPCLECEGSRLRREARYVFLDKTNLPMVSEKSIGEALEFFEQLDLAGQKAKIAEKILKEIRERLQFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIRAADHIVDIG
PGAGVHGGQVIAQGTAEEIMQVEDSITGQFLSGKQKIEIPAKRVSYDAAKLLTLKGASGNNLKQVQLDIPVGLFTCITGV
SGSGKSTLINDTLFPLAQNALNRAERTDVAPYESIDGLSHFDKVIDIDQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYNVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEICYKGKTIHQVLDMTVEEAREFFA
PVPAIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILDEPTTGLHFADIKQLLSVLHKLRDQ
GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIATGTPEEVAKDKRSHTARFLKEILAKG

Nucleotide

• Length: 2829 bp

>NTDB_id=685217 OOL18_RS04485 WP_265411072.1 944935..947763(-) (uvrA) [Actinobacillus pleuropneumoniae strain AP_123]
ATGCAGTACATTGATGTTCGTGGTGCGCGAACCCACAACCTTAAAAATATCAATTTAATTCTTCCTCGAGATAAATTTAT
TGTAATTACCGGCTTATCCGGATCGGGTAAGTCTTCTTTAGCTTTCGATACGCTGTATGCGGAAGGGCAACGCCGTTATG
TGGAATCGCTTTCCGCTTATGCACGCCAATTCCTTTCATTGATGGAAAAACCGGATGTGGACCATATCGAAGGGCTTTCG
CCGGCGATTTCTATCGAGCAAAAATCCACCTCGCATAACCCTCGTTCTACGGTGGGGACGGTAACTGAAATCCACGACTA
TTTACGTCTGTTGTTCGCTCGTGTCGGTGAGCCTCGTTGTCCGGATCACGATTTGCCGCTGGCGGCACAAACCATTTCGC
AGATGGTGGATAGAGTAATGGAAGAGCCGGAAGGCAAGCGTTTGATGCTACTTGCGCCGGTGGTTAAAAATCGTAAAGGC
GAACACGTAAAATTATTGGAAAATTTGACCGCTTCCGGTTATATCCGAGCCAGAATTGACGGCGAAATCTGTGATTTATC
TGATCCGCCGACATTGGAATTACAGAAAAAGCATACGATTGAAGTGGTGGTCGATCGCTTTAAAGTGAGAAGTGATATTG
CCACACGTTTAGCGGAATCTTTTGAAACGGCATTGGATTTATCTGGTTCGACCGCAATTATTGCCGATATGGATGATCCG
AATGCGGAAGAAATCGTCTTTTCGTCTAGTTTTGCTTGTCCGCATTGCGGCTATTCGCTACACGAATTAGAGCCTCGTTT
GTTCTCATTTAATAACCCAGCCGGTGCTTGCCCGACGTGTGACGGCTTAGGGGTAGAGCAGTATTTTGACCCGAATAAAG
TAGTACAAAATCCGGATGTCTCGTTAGCAAGCGGTGCGATTAAAGGTTGGGATCGCCGTAGCTTTTACTATTTCGGTTTG
TTGAAATCGGTGGCGGATCATTATGATTTTTCACTGGATACGCCGTTTAAAGATCTGACTAAAAAACAACGTGACATTAT
TCTGAACGGTTCAAAAGACGAAATCGAATTTGTTTATGTCAATGATCGCGGCGATAAAGTAAAACGTAAACATACCTTTG
AAGGTGTGTTAAATAATATGGCTCGCCGTTATAAAGAAACCGAGTCGAATTCGGTGCGTGAAGAATTAGCGAAATATATC
AATAGCCGCCCGTGTTTAGAGTGTGAAGGATCTCGCTTACGTCGTGAGGCACGTTATGTCTTTTTAGATAAAACCAATTT
GCCGATGGTGTCGGAAAAATCGATTGGCGAAGCGTTAGAATTTTTTGAACAGTTAGATCTTGCCGGTCAAAAAGCGAAGA
TTGCGGAGAAAATTTTAAAAGAAATTCGTGAACGTTTGCAGTTCTTGGTCAATGTCGGCTTGAATTACCTCTCGCTTTCT
CGTTCGGCGGAAACCTTATCCGGCGGTGAGGCGCAACGTATCCGTTTAGCCAGCCAAATCGGTGCAGGCTTGGTTGGGGT
GATGTATGTGCTGGATGAGCCGTCTATCGGATTGCACCAACGTGATAACGAACGTTTATTAAATACCTTAATTCATCTGC
GTAATTTGGGTAATACCGTAATTGTGGTGGAGCATGATGAAGATGCGATCCGTGCCGCAGATCATATTGTCGATATCGGC
CCGGGAGCCGGTGTGCACGGTGGCCAAGTTATTGCACAAGGTACAGCGGAAGAAATTATGCAGGTGGAAGATTCGATTAC
CGGACAATTCCTCTCCGGCAAGCAGAAGATTGAAATTCCGGCAAAACGAGTGTCTTATGACGCGGCTAAATTGCTAACCT
TAAAAGGGGCAAGCGGTAATAACTTAAAACAAGTACAGTTGGATATTCCGGTTGGTTTATTCACTTGTATTACCGGTGTC
TCGGGTTCGGGTAAATCGACTCTAATCAACGATACCTTGTTCCCATTAGCACAAAATGCGTTAAATCGTGCGGAACGTAC
CGATGTCGCACCTTATGAGTCAATTGACGGCTTATCGCATTTCGATAAAGTGATTGATATCGACCAAAGCCCGATTGGGC
GTACACCACGTTCAAACCCGGCAACCTATACCGGTTTATTTACGCCGATTCGTGAATTATTTGCCGGTACGCAAGAAGCG
AGAGCGAGAGGCTATAATGTCGGACGCTTTAGTTTTAATGTGCGTGGCGGACGTTGTGAAGCCTGTCAAGGCGATGGCGT
GATTAAAGTGGAAATGCACTTCCTACCGGATGTATATGTGCCGTGTGATCATTGCAAAGGTAAACGTTATAACCGAGAAA
CTTTGGAAATCTGTTATAAAGGCAAAACGATTCATCAAGTGTTGGATATGACGGTGGAAGAAGCGAGAGAATTTTTCGCA
CCGGTACCGGCGATTGCGCGTAAATTGCAAACCTTAATGGATGTCGGTTTATCGTATATTCGCTTAGGACAGTCCTCGAC
CACGCTTTCCGGCGGTGAAGCGCAGCGTGTTAAATTAGCGACCGAGCTTTCCAAACGTGATACCGGCAAAACGCTGTATA
TTTTAGACGAACCGACCACCGGTTTACATTTTGCCGATATTAAACAGCTACTTTCGGTGTTACACAAATTGCGTGACCAA
GGTAATACGATTGTGGTGATCGAGCATAATTTAGATGTGATTAAAACCGCCGACTGGATTGTGGACTTAGGCCCTGAAGG
CGGTTCGGGCGGCGGACAAATTATTGCGACCGGCACACCGGAAGAGGTAGCGAAAGACAAACGCTCGCACACGGCAAGAT
TTTTAAAAGAGATCTTAGCTAAAGGGTAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-237)

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-398)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	56.823	99.575	0.566
uvrA	Streptococcus pneumoniae TIGR4	56.823	99.575	0.566
uvrA	Streptococcus pneumoniae D39	56.823	99.575	0.566