Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   OOZ27_RS18050 Genome accession   NZ_CP110634
Coordinates   3367050..3367919 (-) Length   289 a.a.
NCBI ID   WP_015714626.1    Uniprot ID   C0JBL3
Organism   Bacillus subtilis strain MG-1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3362050..3372919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OOZ27_RS18015 (OOZ27_18015) mrpE 3362223..3362699 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  OOZ27_RS18020 (OOZ27_18020) mrpF 3362699..3362983 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  OOZ27_RS18025 (OOZ27_18025) mnhG 3362967..3363341 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  OOZ27_RS18030 (OOZ27_18030) yuxO 3363380..3363760 (-) 381 WP_015714624.1 hotdog fold thioesterase -
  OOZ27_RS18035 (OOZ27_18035) comA 3363779..3364423 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  OOZ27_RS18040 (OOZ27_18040) comP 3364504..3366816 (-) 2313 WP_144460405.1 histidine kinase Regulator
  OOZ27_RS18045 (OOZ27_18045) comX 3366832..3367053 (-) 222 WP_014114983.1 competence pheromone ComX -
  OOZ27_RS18050 (OOZ27_18050) comQ 3367050..3367919 (-) 870 WP_015714626.1 polyprenyl synthetase family protein Regulator
  OOZ27_RS18055 (OOZ27_18055) degQ 3368104..3368244 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  OOZ27_RS18060 (OOZ27_18060) - 3368466..3368591 (+) 126 WP_141770195.1 hypothetical protein -
  OOZ27_RS18065 (OOZ27_18065) - 3368706..3369074 (+) 369 WP_014477834.1 hypothetical protein -
  OOZ27_RS18070 (OOZ27_18070) pdeH 3369050..3370279 (-) 1230 WP_014477835.1 cyclic di-GMP phosphodiesterase -
  OOZ27_RS18075 (OOZ27_18075) pncB 3370416..3371888 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  OOZ27_RS18080 (OOZ27_18080) pncA 3371904..3372455 (-) 552 WP_015714627.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 289 a.a.        Molecular weight: 33019.53 Da        Isoelectric Point: 4.6894

>NTDB_id=685167 OOZ27_RS18050 WP_015714626.1 3367050..3367919(-) (comQ) [Bacillus subtilis strain MG-1]
MKEIVDENISNEDLKTKLISFIEEKKQFSFAELAYHHYIAFDGKDVTAIELLASGIELLILSADIFDDIEDKDNLQASWM
KIDPSIVINAATTLYTLSLQVISLVSNNPQLLSLTLQYSLQSLQGQHADLNVKISSESEYIEMIKLKSGSLVTLPSVLGV
YLATGEINETVEEYSLYLGIVEQIANDHHGLYYPDNNDIKTRHNLAFYYLKNKYNQSSIDLLNFYAQENNQINNMDELKK
RLQGSGVIQYLNVIKNIALENFKESFKKLRLDEQRKNKLLDQLLRGNIN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=685167 OOZ27_RS18050 WP_015714626.1 3367050..3367919(-) (comQ) [Bacillus subtilis strain MG-1]
ATGAAGGAGATTGTAGATGAAAATATTTCAAATGAAGACTTAAAAACAAAACTTATTTCTTTTATTGAAGAAAAAAAACA
ATTTTCATTTGCAGAATTAGCTTATCACCATTACATAGCATTTGACGGAAAAGATGTTACAGCAATTGAGTTGTTGGCTT
CTGGTATAGAACTTTTAATTTTATCTGCTGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAAATAGATCCTTCGATAGTGATTAACGCAGCTACTACACTTTATACATTAAGTTTGCAAGTGATAAGTTTAGTTTCAAA
CAATCCGCAACTTCTAAGTCTGACTTTACAATATTCACTTCAATCTTTACAAGGGCAACATGCAGATTTAAATGTAAAAA
TCTCTTCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCAGGTTCTCTTGTAACATTGCCTAGTGTTCTTGGTGTA
TATTTGGCAACTGGAGAAATTAATGAAACAGTCGAGGAGTATTCACTTTATTTGGGTATAGTCGAGCAAATTGCGAATGA
TCACCATGGGCTATATTATCCTGACAATAATGACATAAAAACTAGACACAATCTTGCCTTCTACTATCTAAAAAATAAAT
ATAACCAATCATCGATTGACTTATTAAATTTTTATGCGCAAGAAAATAATCAGATAAATAACATGGATGAATTGAAAAAG
AGGTTACAAGGATCAGGTGTAATCCAATACCTGAATGTTATTAAAAATATAGCACTGGAAAATTTTAAAGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAGAATAAACTACTTGATCAATTATTAAGGGGGAATATAAATTGA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0JBL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

43.056

99.654

0.429