Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   JP49775_RS13190 Genome accession   NZ_AP017922
Coordinates   2622646..2623311 (-) Length   221 a.a.
NCBI ID   WP_029549932.1    Uniprot ID   -
Organism   Staphylococcus aureus strain JP02758     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2617646..2628311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JP49775_RS13170 - 2618107..2618220 (-) 114 WP_014937089.1 hypothetical protein -
  JP49775_RS13175 (JP02758_2447) - 2618889..2620889 (-) 2001 WP_029549934.1 ABC transporter permease -
  JP49775_RS13180 (JP02758_2448) - 2620886..2621641 (-) 756 WP_029549933.1 ABC transporter ATP-binding protein -
  JP49775_RS13185 (JP02758_2449) braS 2621748..2622635 (-) 888 WP_000143420.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  JP49775_RS13190 (JP02758_2450) braR 2622646..2623311 (-) 666 WP_029549932.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  JP49775_RS13195 (JP02758_2451) - 2623337..2623537 (-) 201 WP_029549931.1 hypothetical protein -
  JP49775_RS13200 (JP02758_2452) - 2623734..2625158 (+) 1425 WP_029549930.1 alkaline phosphatase -
  JP49775_RS14200 - 2625218..2625319 (-) 102 WP_000731972.1 SE2200 family small protein -
  JP49775_RS13210 (JP02758_2453) - 2625441..2625896 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  JP49775_RS13215 (JP02758_2454) - 2626140..2626901 (-) 762 WP_029549929.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25419.50 Da        Isoelectric Point: 4.7893

>NTDB_id=68514 JP49775_RS13190 WP_029549932.1 2622646..2623311(-) (braR) [Staphylococcus aureus strain JP02758]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQDQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=68514 JP49775_RS13190 WP_029549932.1 2622646..2623311(-) (braR) [Staphylococcus aureus strain JP02758]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATAGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGACCAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCAGTTAACATGACTCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.095

100

0.991

Multiple sequence alignment