Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   OOZ27_RS11240 Genome accession   NZ_CP110634
Coordinates   2105440..2107443 (+) Length   667 a.a.
NCBI ID   WP_015714012.1    Uniprot ID   -
Organism   Bacillus subtilis strain MG-1     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2100440..2112443
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OOZ27_RS11200 (OOZ27_11200) pghL 2100807..2101565 (+) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  OOZ27_RS11205 (OOZ27_11205) - 2101592..2102041 (-) 450 WP_015714007.1 YndM family protein -
  OOZ27_RS11210 (OOZ27_11210) fosB 2102250..2102668 (+) 419 Protein_2156 metallothiol transferase FosB -
  OOZ27_RS11215 (OOZ27_11215) - 2102592..2102931 (+) 340 Protein_2157 hypothetical protein -
  OOZ27_RS11220 (OOZ27_11220) dinR/lexA 2103218..2103835 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  OOZ27_RS11225 (OOZ27_11225) yneA 2103985..2104302 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  OOZ27_RS11230 (OOZ27_11230) dinL 2104321..2104974 (+) 654 WP_015714011.1 recombinase family protein -
  OOZ27_RS11235 (OOZ27_11235) ynzC 2105038..2105271 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  OOZ27_RS11240 (OOZ27_11240) recP/tkt 2105440..2107443 (+) 2004 WP_015714012.1 transketolase Machinery gene
  OOZ27_RS11245 (OOZ27_11245) sirA 2107596..2108042 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  OOZ27_RS11250 (OOZ27_11250) yneF 2108128..2108346 (+) 219 WP_003221221.1 YneF family protein -
  OOZ27_RS11255 (OOZ27_11255) ynzD 2108420..2108593 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  OOZ27_RS11260 (OOZ27_11260) ccdA 2108813..2109520 (+) 708 WP_003231585.1 cytochrome c-type biogenesis protein CcdA -
  OOZ27_RS11265 (OOZ27_11265) yneI 2109609..2109971 (+) 363 WP_003245707.1 response regulator -
  OOZ27_RS11270 (OOZ27_11270) yneJ 2110050..2110541 (+) 492 WP_074794556.1 CcdC family protein -
  OOZ27_RS11275 (OOZ27_11275) yneK 2110572..2111000 (-) 429 WP_015251998.1 DynA interaction protein YneK -
  OOZ27_RS11280 (OOZ27_11280) cotM 2111235..2111627 (-) 393 WP_015251997.1 outer spore coat protein CotM -
  OOZ27_RS11285 (OOZ27_11285) sspP 2111708..2111854 (-) 147 WP_003221237.1 small acid-soluble spore protein P -
  OOZ27_RS11290 (OOZ27_11290) sspO 2111886..2112032 (-) 147 WP_003244839.1 acid-soluble spore protein SspO -

Sequence


Protein


Download         Length: 667 a.a.        Molecular weight: 72300.39 Da        Isoelectric Point: 4.7291

>NTDB_id=685124 OOZ27_RS11240 WP_015714012.1 2105440..2107443(+) (recP/tkt) [Bacillus subtilis strain MG-1]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFVLSAGHGSALLYSMLHLSG
FDLSIEDLKGFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLQLGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIEELTAAIEKARQNEKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGKEESKLTKEAYAWTYEEDFYVPSEVYEHFAAAVKESGEKKEQEWNAQFAKYKE
VYPELAEQLELAIKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGLAKKIPFFVGGSADLAGSNKTTIKNAGDFTAVDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLAALMGLPVTYVFTHDSIAVGEDGPTHEPVEQLA
SLRAMPNLSLIRPADGNETAAAWKLAVQSTDHPTALVLTRQNLPTIDQTSEEALAGVEKGAYVVSKSKNETPDALLIASG
SEVGLAIEAQAELAKENIDVSVVSMPSMDRFEKQSDEYKNEVLPADVKKRLAIEMGSSFGWGKYTGLEGDVLGIDRFGAS
APGETIINEYGFSVPNVVNRVKALINK

Nucleotide


Download         Length: 2004 bp        

>NTDB_id=685124 OOZ27_RS11240 WP_015714012.1 2105440..2107443(+) (recP/tkt) [Bacillus subtilis strain MG-1]
ATGGATACAATTGAAAAGAAATCAGTTGCTACCATTCGCACACTGTCAATAGACGCTATTGAAAAAGCAAATTCTGGTCA
CCCAGGGATGCCGATGGGAGCCGCTCCAATGGCATACACGCTGTGGACAAAATTTATGAACGTAAGTCCGGCAAACCCTG
GCTGGTTTAACCGTGACCGTTTTGTTTTATCTGCTGGACACGGGTCAGCACTATTATACAGCATGCTTCATTTAAGCGGG
TTTGATCTTAGTATTGAAGATCTTAAGGGATTCCGCCAGTGGGGCAGCAAAACACCAGGACATCCGGAATTCGGACATAC
TGCCGGTGTTGATGCTACAACAGGTCCGCTTGGCCAAGGAATTGCCATGGCAGTCGGTATGGCAATTGCTGAACGCCATT
TAGCGGAAACATACAACCGCGATTCATTTAACGTAGTCGATCATTATACATACAGTATTTGCGGTGATGGTGATTTAATG
GAAGGTATTTCTTCTGAAGCCGCTTCACTCGCAGGCCATCTTCAGCTTGGCCGTCTGATCGTACTATACGATTCTAATGA
CATCTCTCTTGATGGAGACCTCGACCGTTCATTCTCTGAAAACGTGAAACAGCGTTTTGAAGCAATGAATTGGGAAGTTC
TTTATGTTGAGGATGGAAACAATATTGAAGAATTAACAGCGGCTATCGAAAAAGCACGCCAAAATGAAAAGAAACCTACA
TTAATTGAAGTGAAAACGACAATCGGATTCGGTTCACCTAACCGTGCCGGTACATCCGGTGTTCACGGTGCGCCGCTTGG
TAAAGAGGAAAGCAAATTAACAAAAGAAGCTTACGCGTGGACATATGAAGAAGACTTCTACGTTCCGTCAGAAGTTTATG
AGCATTTCGCTGCAGCTGTTAAAGAATCAGGTGAGAAAAAAGAACAAGAATGGAATGCTCAATTCGCTAAATATAAAGAA
GTTTATCCTGAACTTGCTGAACAGCTTGAACTGGCAATCAAAGGAGAGCTTCCGAAGGACTGGGATCAAGAGGTTCCTGT
GTATGAAAAAGGAAGCAGCCTGGCATCCCGTGCATCTTCCGGTGAAGTTCTCAACGGACTTGCGAAAAAAATTCCTTTCT
TTGTCGGAGGTTCTGCTGACCTAGCGGGATCGAACAAAACGACTATTAAAAATGCCGGTGATTTTACAGCGGTTGATTAC
GCAGGCAAAAACTTCTGGTTTGGTGTACGTGAATTTGCGATGGGTGCGGCCTTAAACGGTATGGCGCTTCATGGCGGTCT
TCGTGTATTCGGCGGAACTTTCTTTGTCTTCTCTGATTACCTGCGTCCTGCGATTCGCCTTGCAGCGTTAATGGGCCTTC
CTGTGACATATGTCTTCACACATGACAGTATTGCGGTTGGTGAAGACGGTCCGACGCACGAGCCTGTTGAACAGCTTGCT
TCACTCCGTGCGATGCCTAACCTTTCTTTGATCCGTCCAGCAGACGGCAATGAGACAGCAGCAGCATGGAAGCTTGCAGT
GCAAAGCACTGACCACCCAACAGCGCTAGTGCTTACACGTCAAAACCTTCCTACCATCGATCAAACATCTGAAGAAGCAT
TGGCAGGAGTAGAAAAAGGTGCATATGTCGTTTCTAAATCTAAAAACGAAACACCTGACGCTCTTCTCATCGCTTCCGGA
TCAGAGGTAGGTCTTGCAATTGAAGCGCAGGCTGAATTGGCAAAAGAAAATATCGATGTTTCTGTTGTCAGCATGCCTTC
AATGGACCGTTTTGAGAAACAATCTGATGAATACAAAAACGAAGTCCTTCCTGCAGATGTGAAAAAACGTCTTGCAATTG
AAATGGGCTCATCATTTGGATGGGGCAAATACACAGGGCTTGAAGGTGACGTTCTCGGCATAGACCGATTCGGTGCATCT
GCTCCAGGTGAAACCATCATTAACGAATACGGCTTCTCAGTTCCGAACGTAGTGAATCGAGTTAAGGCATTAATCAATAA
GTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

56.647

99.25

0.562