Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   OOZ27_RS11220 Genome accession   NZ_CP110634
Coordinates   2103218..2103835 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain MG-1     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2098218..2108835
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OOZ27_RS11190 (OOZ27_11190) yndJ 2098549..2100189 (+) 1641 WP_015714004.1 YndJ family protein -
  OOZ27_RS11195 (OOZ27_11195) - 2100267..2100581 (+) 315 WP_029726671.1 hypothetical protein -
  OOZ27_RS11200 (OOZ27_11200) pghL 2100807..2101565 (+) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  OOZ27_RS11205 (OOZ27_11205) - 2101592..2102041 (-) 450 WP_015714007.1 YndM family protein -
  OOZ27_RS11210 (OOZ27_11210) fosB 2102250..2102668 (+) 419 Protein_2156 metallothiol transferase FosB -
  OOZ27_RS11215 (OOZ27_11215) - 2102592..2102931 (+) 340 Protein_2157 hypothetical protein -
  OOZ27_RS11220 (OOZ27_11220) dinR/lexA 2103218..2103835 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  OOZ27_RS11225 (OOZ27_11225) yneA 2103985..2104302 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  OOZ27_RS11230 (OOZ27_11230) dinL 2104321..2104974 (+) 654 WP_015714011.1 recombinase family protein -
  OOZ27_RS11235 (OOZ27_11235) ynzC 2105038..2105271 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  OOZ27_RS11240 (OOZ27_11240) recP/tkt 2105440..2107443 (+) 2004 WP_015714012.1 transketolase Machinery gene
  OOZ27_RS11245 (OOZ27_11245) sirA 2107596..2108042 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  OOZ27_RS11250 (OOZ27_11250) yneF 2108128..2108346 (+) 219 WP_003221221.1 YneF family protein -
  OOZ27_RS11255 (OOZ27_11255) ynzD 2108420..2108593 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=685123 OOZ27_RS11220 WP_003238209.1 2103218..2103835(-) (dinR/lexA) [Bacillus subtilis strain MG-1]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=685123 OOZ27_RS11220 WP_003238209.1 2103218..2103835(-) (dinR/lexA) [Bacillus subtilis strain MG-1]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1