Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EFK13_RS00580 | Genome accession | NZ_CP096889 |
| Coordinates | 104471..106903 (+) | Length | 810 a.a. |
| NCBI ID | WP_075747654.1 | Uniprot ID | - |
| Organism | Bacillus cabrialesii strain TE3 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 99471..111903
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFK13_RS00565 (EFK13_00565) | ctsR | 102345..102809 (+) | 465 | WP_064814468.1 | transcriptional regulator CtsR | - |
| EFK13_RS00570 (EFK13_00570) | mcsA | 102823..103383 (+) | 561 | WP_064814469.1 | protein-arginine kinase activator protein McsA | - |
| EFK13_RS00575 (EFK13_00575) | - | 103383..104474 (+) | 1092 | WP_064814470.1 | protein arginine kinase | - |
| EFK13_RS00580 (EFK13_00580) | clpC | 104471..106903 (+) | 2433 | WP_075747654.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| EFK13_RS00585 (EFK13_00585) | radA | 106995..108371 (+) | 1377 | WP_129506944.1 | DNA repair protein RadA | Machinery gene |
| EFK13_RS00590 (EFK13_00590) | disA | 108375..109457 (+) | 1083 | WP_075747656.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| EFK13_RS00595 (EFK13_00595) | - | 109573..110673 (+) | 1101 | WP_129506943.1 | PIN/TRAM domain-containing protein | - |
| EFK13_RS00600 (EFK13_00600) | ispD | 110688..111386 (+) | 699 | WP_129506942.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| EFK13_RS00605 (EFK13_00605) | ispF | 111379..111855 (+) | 477 | WP_003225745.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90032.60 Da Isoelectric Point: 6.3040
>NTDB_id=684841 EFK13_RS00580 WP_075747654.1 104471..106903(+) (clpC) [Bacillus cabrialesii strain TE3]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGK
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGK
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=684841 EFK13_RS00580 WP_075747654.1 104471..106903(+) (clpC) [Bacillus cabrialesii strain TE3]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTCCGTTTAGGTCATAA
TAATATTGGCACTGAGCATATTTTATTAGGGCTGGTACGAGAAGGAGAAGGAATTGCTGCTAAAGCTCTTCAAGCGCTTG
GACTTGGTTCAGATAAAATTCAAAAAGAAGTGGAAAGTTTAATCGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCAAGAGCCAAAAAAGTCATTGAGCTATCAATGGATGAGGCAAGAAAACTCGGTCATTCTTATGTTGGAACGGAACA
TATTCTTCTTGGCCTGATTCGTGAAGGAGAAGGTGTTGCTGCAAGAGTTCTGAACAACCTCGGTGTCAGCTTAAATAAAG
CAAGGCAGCAAGTGCTTCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGGCAGGAACAAACAGCAATGCGAATACA
CCTACGCTTGACAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTTATCGGCAGAAGCAA
GGAAATCCAGCGTGTAATCGAAGTGTTGAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGAGAACCAGGTGTAGGTA
AAACGGCAATCGCTGAAGGTTTGGCACAGCAAATTATCAATAACGAAGTTCCTGAAATCTTGCGCGATAAACGCGTGATG
ACATTAGACATGGGAACAGTAGTTGCCGGTACAAAATATCGCGGAGAATTTGAGGATCGCCTGAAGAAGGTCATGGATGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAGCTCCATACATTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGATGCATCTAATATTCTAAAGCCTTCACTTGCTCGCGGTGAACTTCAATGTATTGGAGCGACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATTCAGGTTGATCAGCCGTCTGCAGATGAAAG
CATTCAAATTTTAAAAGGCTTGCGTGACCGATACGAGGCTCACCACCGCGTATCAATTACAGACGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGCTTCCTTCCGGATAAAGCCATTGACTTGATCGATGAAGCGGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCCGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG
AGGATACAAAGAAATCTTGGAAAGAGAAGCAAGGGCAGGAGAATTCTGAGGTTACTGTTGATGATATTGCGATGGTTGTA
TCCAGCTGGACCGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACCGATAAGCTTCTCAATATGGAAAGCATTCTTCA
CTCCCGTGTCATCGGTCAGGATGAAGCGGTTGTAGCTGTTGCAAAAGCAGTCAGACGTGCGAGAGCAGGGTTAAAGGACC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCGATTTTCGGCGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATACGTAGGATATGATGAAGGAGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTTG
TTCTTCTTGATGAAATCGAGAAAGCACACCCTGATGTCTTCAATATCCTTCTGCAAGTTCTTGAAGACGGACGATTGACT
GATTCTAAAGGACGCACAGTCGATTTCCGCAATACCATTCTGATCATGACATCAAACGTTGGAGCAAGTGAACTGAAACG
CAATAAATATGTCGGATTTAACGTTCAGGATGAGACACAGAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTGA
AACGAGCGTTTAGACCTGAGTTTATCAACCGGATTGATGAAATCATCGTCTTCCATTCACTTGAGAAGAAACACCTTACT
GAAATCGTGTCATTAATGTCTGATCAATTAACGAAACGCCTGAAAGAACAAGATCTTTCTATCGAATTGACAGATGCTGC
AAAAGCGAAAGTTGCGGAAGAGGGCGTTGACCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCGATCCAAAAACATGTCG
AGGATCGTTTATCAGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTTGATGTAGAAGACGGCAAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTCCGTTTAGGTCATAA
TAATATTGGCACTGAGCATATTTTATTAGGGCTGGTACGAGAAGGAGAAGGAATTGCTGCTAAAGCTCTTCAAGCGCTTG
GACTTGGTTCAGATAAAATTCAAAAAGAAGTGGAAAGTTTAATCGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCAAGAGCCAAAAAAGTCATTGAGCTATCAATGGATGAGGCAAGAAAACTCGGTCATTCTTATGTTGGAACGGAACA
TATTCTTCTTGGCCTGATTCGTGAAGGAGAAGGTGTTGCTGCAAGAGTTCTGAACAACCTCGGTGTCAGCTTAAATAAAG
CAAGGCAGCAAGTGCTTCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGGCAGGAACAAACAGCAATGCGAATACA
CCTACGCTTGACAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTTATCGGCAGAAGCAA
GGAAATCCAGCGTGTAATCGAAGTGTTGAGCCGCAGAACGAAAAACAACCCTGTTCTCATTGGAGAACCAGGTGTAGGTA
AAACGGCAATCGCTGAAGGTTTGGCACAGCAAATTATCAATAACGAAGTTCCTGAAATCTTGCGCGATAAACGCGTGATG
ACATTAGACATGGGAACAGTAGTTGCCGGTACAAAATATCGCGGAGAATTTGAGGATCGCCTGAAGAAGGTCATGGATGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAGCTCCATACATTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGATGCATCTAATATTCTAAAGCCTTCACTTGCTCGCGGTGAACTTCAATGTATTGGAGCGACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATTCAGGTTGATCAGCCGTCTGCAGATGAAAG
CATTCAAATTTTAAAAGGCTTGCGTGACCGATACGAGGCTCACCACCGCGTATCAATTACAGACGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGCTTCCTTCCGGATAAAGCCATTGACTTGATCGATGAAGCGGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCTCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAAGAGTTTGAAAAAGCCGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG
AGGATACAAAGAAATCTTGGAAAGAGAAGCAAGGGCAGGAGAATTCTGAGGTTACTGTTGATGATATTGCGATGGTTGTA
TCCAGCTGGACCGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACCGATAAGCTTCTCAATATGGAAAGCATTCTTCA
CTCCCGTGTCATCGGTCAGGATGAAGCGGTTGTAGCTGTTGCAAAAGCAGTCAGACGTGCGAGAGCAGGGTTAAAGGACC
CTAAACGCCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGTGTAGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCGATTTTCGGCGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATACGTAGGATATGATGAAGGAGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTTG
TTCTTCTTGATGAAATCGAGAAAGCACACCCTGATGTCTTCAATATCCTTCTGCAAGTTCTTGAAGACGGACGATTGACT
GATTCTAAAGGACGCACAGTCGATTTCCGCAATACCATTCTGATCATGACATCAAACGTTGGAGCAAGTGAACTGAAACG
CAATAAATATGTCGGATTTAACGTTCAGGATGAGACACAGAATCATAAAGACATGAAAGATAAAGTGATGGGTGAATTGA
AACGAGCGTTTAGACCTGAGTTTATCAACCGGATTGATGAAATCATCGTCTTCCATTCACTTGAGAAGAAACACCTTACT
GAAATCGTGTCATTAATGTCTGATCAATTAACGAAACGCCTGAAAGAACAAGATCTTTCTATCGAATTGACAGATGCTGC
AAAAGCGAAAGTTGCGGAAGAGGGCGTTGACCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCGATCCAAAAACATGTCG
AGGATCGTTTATCAGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTTGATGTAGAAGACGGCAAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
99.259 |
100 |
0.993 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.938 |
100 |
0.5 |
| clpC | Streptococcus thermophilus LMD-9 |
46.602 |
100 |
0.474 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.359 |
100 |
0.472 |
| clpC | Streptococcus pneumoniae Rx1 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.117 |
99.877 |
0.451 |
| clpC | Streptococcus mutans UA159 |
43.373 |
100 |
0.444 |
| clpE | Streptococcus mutans UA159 |
53.313 |
80.123 |
0.427 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.523 |
87.778 |
0.426 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.234 |
80.123 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae D39 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae R6 |
53.612 |
76.914 |
0.412 |