Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   LFL98_RS19310 Genome accession   NZ_CP110365
Coordinates   3690007..3690381 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain HY2-62     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3685007..3695381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LFL98_RS19285 (LFL98_19290) - 3685170..3685331 (-) 162 WP_003227632.1 hypothetical protein -
  LFL98_RS19290 (LFL98_19295) glpX 3685546..3686511 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  LFL98_RS19295 (LFL98_19300) murAB 3686542..3687831 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  LFL98_RS19300 (LFL98_19305) fsa 3688211..3688849 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  LFL98_RS19305 (LFL98_19310) fbaA 3688969..3689826 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  LFL98_RS19310 (LFL98_19315) letA 3690007..3690381 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  LFL98_RS19315 (LFL98_19320) ywjG 3690547..3691068 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  LFL98_RS19320 (LFL98_19325) pyrG 3691150..3692757 (-) 1608 WP_003227612.1 CTP synthase (glutamine hydrolyzing) -
  LFL98_RS19325 (LFL98_19330) rpoE 3692999..3693520 (-) 522 WP_277736765.1 DNA-directed RNA polymerase subunit delta -
  LFL98_RS19330 (LFL98_19335) acdA 3693703..3694842 (-) 1140 WP_015251002.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=684775 LFL98_RS19310 WP_003227621.1 3690007..3690381(-) (letA) [Bacillus subtilis strain HY2-62]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=684775 LFL98_RS19310 WP_003227621.1 3690007..3690381(-) (letA) [Bacillus subtilis strain HY2-62]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363