Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   CTB89_RS13820 Genome accession   NZ_AP017891
Coordinates   2699309..2699974 (-) Length   221 a.a.
NCBI ID   WP_000697883.1    Uniprot ID   A0A5F0HLH2
Organism   Staphylococcus aureus strain GN3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2694309..2704974
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CTB89_RS13800 - 2694779..2694892 (-) 114 WP_072468803.1 hypothetical protein -
  CTB89_RS13805 - 2695551..2697551 (-) 2001 WP_020977629.1 ABC transporter permease -
  CTB89_RS13810 - 2697548..2698303 (-) 756 WP_120173221.1 ABC transporter ATP-binding protein -
  CTB89_RS13815 braS 2698411..2699298 (-) 888 WP_000143422.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  CTB89_RS13820 braR 2699309..2699974 (-) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  CTB89_RS13825 - 2700000..2700200 (-) 201 WP_000604727.1 hypothetical protein -
  CTB89_RS13830 - 2700398..2701822 (+) 1425 WP_064133848.1 alkaline phosphatase -
  CTB89_RS14420 - 2701892..2702002 (+) 111 WP_001791296.1 hypothetical protein -
  CTB89_RS13840 - 2702105..2702560 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  CTB89_RS13845 - 2702805..2703566 (-) 762 WP_000323443.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25433.52 Da        Isoelectric Point: 4.7961

>NTDB_id=68435 CTB89_RS13820 WP_000697883.1 2699309..2699974(-) (braR) [Staphylococcus aureus strain GN3]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSMTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=68435 CTB89_RS13820 WP_000697883.1 2699309..2699974(-) (braR) [Staphylococcus aureus strain GN3]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATTCTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCGATGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5F0HLH2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

99.548

100

0.995

Multiple sequence alignment