Detailed information NTG0068434

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: HRS14_RS16575
• Genome accession: NZ_AP022650
• Coordinates: 3366416..3367621 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain 09-02E
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3361416..3372621

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HRS14_RS16560 (Esc0902E_32050)	-	3361931..3363607 (+)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-
HRS14_RS16565 (Esc0902E_32060)	kdsB	3363617..3364357 (+)	741	WP_000030745.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
HRS14_RS16570 (Esc0902E_32070)	-	3364354..3366381 (+)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
HRS14_RS16575 (Esc0902E_32080)	kpsS	3366416..3367621 (+)	1206	WP_001161835.1	capsular biosynthesis protein	Regulator
HRS14_RS16580 (Esc0902E_32090)	-	3367771..3369000 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
HRS14_RS16585 (Esc0902E_32100)	-	3368990..3370138 (-)	1149	WP_024188362.1	DUF6716 putative glycosyltransferase	-
HRS14_RS16590 (Esc0902E_32110)	neuC	3370131..3371306 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
HRS14_RS16595 (Esc0902E_32120)	-	3371303..3372559 (-)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=68434 HRS14_RS16575 WP_001161835.1 3366416..3367621(+) (kpsS) [Escherichia coli strain 09-02E]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=68434 HRS14_RS16575 WP_001161835.1 3366416..3367621(+) (kpsS) [Escherichia coli strain 09-02E]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387