Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   CTB89_RS13815 Genome accession   NZ_AP017891
Coordinates   2698411..2699298 (-) Length   295 a.a.
NCBI ID   WP_000143422.1    Uniprot ID   A0AB73JC73
Organism   Staphylococcus aureus strain GN3     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2693411..2704298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CTB89_RS13780 - 2693429..2693522 (+) 94 Protein_2582 hypothetical protein -
  CTB89_RS13785 - 2693630..2694127 (-) 498 WP_001065267.1 glutathione peroxidase -
  CTB89_RS13790 - 2694137..2694397 (-) 261 WP_011382405.1 hypothetical protein -
  CTB89_RS13800 - 2694779..2694892 (-) 114 WP_072468803.1 hypothetical protein -
  CTB89_RS13805 - 2695551..2697551 (-) 2001 WP_020977629.1 ABC transporter permease -
  CTB89_RS13810 - 2697548..2698303 (-) 756 WP_120173221.1 ABC transporter ATP-binding protein -
  CTB89_RS13815 braS 2698411..2699298 (-) 888 WP_000143422.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  CTB89_RS13820 braR 2699309..2699974 (-) 666 WP_000697883.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  CTB89_RS13825 - 2700000..2700200 (-) 201 WP_000604727.1 hypothetical protein -
  CTB89_RS13830 - 2700398..2701822 (+) 1425 WP_064133848.1 alkaline phosphatase -
  CTB89_RS14420 - 2701892..2702002 (+) 111 WP_001791296.1 hypothetical protein -
  CTB89_RS13840 - 2702105..2702560 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  CTB89_RS13845 - 2702805..2703566 (-) 762 WP_000323443.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34031.29 Da        Isoelectric Point: 5.8962

>NTDB_id=68434 CTB89_RS13815 WP_000143422.1 2698411..2699298(-) (braS) [Staphylococcus aureus strain GN3]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGVGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=68434 CTB89_RS13815 WP_000143422.1 2698411..2699298(-) (braS) [Staphylococcus aureus strain GN3]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTGTTGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGCCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99

Multiple sequence alignment