Detailed information NTG0684280

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: MOV22_RS16670
• Genome accession: NZ_CP096810
• Coordinates: 3435333..3436133 (-)
• Length: 266 a.a.
• NCBI ID: WP_004145898.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae strain Bio19
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3430333..3441133

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MOV22_RS16650 (MOV22_16650)	dksA	3430913..3431368 (-)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-
MOV22_RS16655 (MOV22_16655)	sfsA	3431531..3432247 (-)	717	WP_048265185.1	DNA/RNA nuclease SfsA	-
MOV22_RS16660 (MOV22_16660)	thpR	3432247..3432783 (-)	537	WP_004177389.1	RNA 2',3'-cyclic phosphodiesterase	-
MOV22_RS16665 (MOV22_16665)	hrpB	3432856..3435285 (+)	2430	WP_023302300.1	ATP-dependent helicase HrpB	-
MOV22_RS16670 (MOV22_16670)	pilD	3435333..3436133 (-)	801	WP_004145898.1	A24 family peptidase	Machinery gene
MOV22_RS16675 (MOV22_16675)	-	3436130..3436876 (-)	747	WP_012737410.1	type II secretion system protein N	-
MOV22_RS16680 (MOV22_16680)	-	3436866..3437351 (-)	486	WP_004145896.1	type II secretion system protein M	-
MOV22_RS16685 (MOV22_16685)	gspL	3437344..3438537 (-)	1194	WP_087774561.1	type II secretion system protein GspL	-
MOV22_RS16690 (MOV22_16690)	gspK	3438524..3439510 (-)	987	WP_004213439.1	type II secretion system minor pseudopilin GspK	-
MOV22_RS16695 (MOV22_16695)	gspJ	3439507..3440103 (-)	597	WP_004145893.1	type II secretion system minor pseudopilin GspJ	-
MOV22_RS16700 (MOV22_16700)	gspI	3440100..3440465 (-)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
MOV22_RS16705 (MOV22_16705)	gspH	3440468..3440977 (-)	510	WP_021441218.1	type II secretion system minor pseudopilin GspH	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29389.01 Da
• Isoelectric Point: 8.8894

>NTDB_id=684280 MOV22_RS16670 WP_004145898.1 3435333..3436133(-) (pilD) [Klebsiella pneumoniae strain Bio19]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMV

Nucleotide

• Length: 801 bp

>NTDB_id=684280 MOV22_RS16670 WP_004145898.1 3435333..3436133(-) (pilD) [Klebsiella pneumoniae strain Bio19]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTGCTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGATCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGCCTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGCTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTACTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGGGTATTTTTCTCTGGCAGCAGATGGTCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.434	99.624	0.492
pilD	Vibrio campbellii strain DS40M4	46.182	100	0.477
pilD	Acinetobacter nosocomialis M2	46.008	98.872	0.455
pilD	Acinetobacter baumannii D1279779	45.247	98.872	0.447
pilD	Neisseria gonorrhoeae MS11	43.295	98.12	0.425