Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   CTB89_RS05155 Genome accession   NZ_AP017891
Coordinates   1043159..1044145 (+) Length   328 a.a.
NCBI ID   WP_020977132.1    Uniprot ID   -
Organism   Staphylococcus aureus strain GN3     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1038159..1049145
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CTB89_RS05125 tnpA 1038225..1038710 (+) 486 WP_000093393.1 IS200/IS605 family transposase -
  CTB89_RS05130 - 1038831..1039334 (+) 504 Protein_963 ABC transporter permease -
  CTB89_RS05135 opp4C 1039346..1040227 (+) 882 WP_001180264.1 oligopeptide ABC transporter permease -
  CTB89_RS05140 trpS 1040269..1041258 (-) 990 WP_000448931.1 tryptophan--tRNA ligase -
  CTB89_RS05145 spxA 1041553..1041948 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  CTB89_RS05150 mecA 1042319..1043038 (+) 720 WP_001217728.1 adaptor protein MecA -
  CTB89_RS05155 coiA 1043159..1044145 (+) 987 WP_020977132.1 competence protein CoiA family protein Machinery gene
  CTB89_RS05160 pepF 1044193..1046001 (+) 1809 WP_020977133.1 oligoendopeptidase F -
  CTB89_RS05165 tnpA 1046596..1047081 (+) 486 WP_000093393.1 IS200/IS605 family transposase -
  CTB89_RS05170 yjbH 1047204..1048010 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  CTB89_RS05175 - 1048033..1048398 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  CTB89_RS05180 - 1048502..1049095 (-) 594 WP_000224622.1 CYTH domain-containing protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38634.19 Da        Isoelectric Point: 9.6530

>NTDB_id=68405 CTB89_RS05155 WP_020977132.1 1043159..1044145(+) (coiA) [Staphylococcus aureus strain GN3]
MLVALNGEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EMEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPITRKL
HTFNLEKKQIMMFQQIQYIGGHKYVAEKGNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLH
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=68405 CTB89_RS05155 WP_020977132.1 1043159..1044145(+) (coiA) [Staphylococcus aureus strain GN3]
ATGTTAGTAGCTTTAAATGGAGAAAAGGAACGCGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATGGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATATAGGCGGGCACAAATATGTCGCTGA
AAAAGGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAATTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAGTTGCAT
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(10-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.341

100

0.963
  coiA Staphylococcus aureus MW2

96.341

100

0.963

Multiple sequence alignment