Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SNAG_RS04905 Genome accession   NZ_AP017652
Coordinates   928406..929215 (+) Length   269 a.a.
NCBI ID   WP_096407084.1    Uniprot ID   A0A1E1GAN6
Organism   Streptococcus sp. NPS 308     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 923406..934215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SNAG_RS04885 (SNAG_0954) pta 924065..925039 (+) 975 WP_096407073.1 phosphate acetyltransferase -
  SNAG_RS04890 (SNAG_0955) mutY 925122..926300 (+) 1179 WP_096407076.1 A/G-specific adenine glycosylase -
  SNAG_RS04895 (SNAG_0956) micA 926358..927062 (+) 705 WP_096407079.1 response regulator YycF Regulator
  SNAG_RS04900 (SNAG_0957) micB 927055..928404 (+) 1350 WP_096407081.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SNAG_RS04905 (SNAG_0958) vicX 928406..929215 (+) 810 WP_096407084.1 MBL fold metallo-hydrolase Regulator
  SNAG_RS04910 (SNAG_0959) - 929310..930083 (+) 774 WP_096407086.1 ion transporter -
  SNAG_RS04915 (SNAG_0960) - 930121..930468 (-) 348 WP_096407089.1 PedC/BrcD family bacteriocin maturation disulfide isomerase -
  SNAG_RS04920 (SNAG_0961) - 930579..932297 (-) 1719 WP_096407092.1 phospho-sugar mutase -
  SNAG_RS04925 (SNAG_0962) - 932684..933838 (+) 1155 WP_096407094.1 DUF4352 domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29901.85 Da        Isoelectric Point: 6.1732

>NTDB_id=68349 SNAG_RS04905 WP_096407084.1 928406..929215(+) (vicX) [Streptococcus sp. NPS 308]
MSEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLGEINRKPEDLDAILITHEHADHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAVAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGADAMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFQVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=68349 SNAG_RS04905 WP_096407084.1 928406..929215(+) (vicX) [Streptococcus sp. NPS 308]
ATGAGTGAAAAAGGCTTTAAATACAGTATTTTAGCATCGGGTTCTAGTGGTAATTCCTTCTATCTAGAAACCCCTAAGAA
AAAGATTTTAGTAGACGCAGGATTATCTGGTAAAAAAATTACAAGCTTATTGGGTGAAATCAATCGTAAACCAGAAGATT
TGGATGCTATTTTGATTACGCATGAGCATGCTGATCATATACATGGTGTTGGAGTTTTAGCTCGTAAGTATGGCATGGAT
CTTTACGCCAATGAAAAGACCTGGCAAGCTATGGAAAATAGTAAGTATCTAGGTAAAGTTGACTCTTCACAAAAGCATAT
CTTTGAAATGGGGAAAACCAAAACATTTGGAGATATCGACATTGAGAGTTTTGGAGTTAGCCATGATGCAGTTGCTCCCC
AATTCTACCGTTTTATGAAGGATGACAAGAGCTTTGTTATGCTGACGGATACAGGTTATGTTAGTGACCGTATGGCTGGC
ATTGTCGAGAATGCAGATGGCTATCTGATCGAGTCAAATCATGATGTTGAAATTCTGAGAGCTGGCTCTTATGCATGGCG
ACTCAAGCAACGGATTCTGTCTGACCTTGGCCACCTCTCGAATGAAGACGGTGCAGATGCCATGATTCGCACACTTGGGA
ATCGTACCAAGAAAATTTACCTAGGACATCTATCTAAAGAGAATAATATCAAGGAGCTAGCCCACATGACCATGGTCAAT
CAGTTAGCTCAAGCAGATCTAGGAGTAGGAGTGGATTTTCAAGTTTACGATACGTCTCCAGACACTGCAACACCTTTAAC
GGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1E1GAN6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.952

100

0.77

Multiple sequence alignment