Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | SNAG_RS02980 | Genome accession | NZ_AP017652 |
| Coordinates | 546831..548063 (+) | Length | 410 a.a. |
| NCBI ID | WP_096406382.1 | Uniprot ID | - |
| Organism | Streptococcus sp. NPS 308 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 541831..553063
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SNAG_RS02945 (SNAG_0583) | galE | 542493..543512 (+) | 1020 | WP_096406372.1 | UDP-glucose 4-epimerase GalE | - |
| SNAG_RS02950 (SNAG_0584) | - | 543496..544479 (+) | 984 | WP_172842380.1 | glycosyltransferase family 2 protein | - |
| SNAG_RS02955 | - | 544562..544765 (-) | 204 | WP_004240353.1 | ferredoxin | - |
| SNAG_RS02960 (SNAG_0585) | - | 544811..545320 (+) | 510 | WP_000410182.1 | SAG1386/EF1546 family surface-associated protein | - |
| SNAG_RS02965 (SNAG_0586) | cmk | 545330..546004 (+) | 675 | WP_096406377.1 | (d)CMP kinase | - |
| SNAG_RS02970 (SNAG_0587) | - | 546123..546629 (+) | 507 | WP_096406380.1 | dihydrofolate reductase | - |
| SNAG_RS02980 (SNAG_0589) | clpX | 546831..548063 (+) | 1233 | WP_096406382.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| SNAG_RS02985 (SNAG_0590) | yihA | 548072..548659 (+) | 588 | WP_000405203.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| SNAG_RS02990 (SNAG_0591) | - | 548669..549049 (+) | 381 | WP_001140420.1 | RidA family protein | - |
| SNAG_RS02995 (SNAG_0592) | rapZ | 549101..549991 (+) | 891 | WP_096406386.1 | RNase adapter RapZ | - |
| SNAG_RS03000 (SNAG_0593) | - | 549988..550965 (+) | 978 | WP_096406389.1 | YvcK family protein | - |
| SNAG_RS03005 (SNAG_0594) | whiA | 550962..551873 (+) | 912 | WP_096406391.1 | DNA-binding protein WhiA | - |
| SNAG_RS03010 (SNAG_0595) | - | 551906..552874 (-) | 969 | WP_096406394.1 | NAD(P)/FAD-dependent oxidoreductase | - |
Sequence
Protein
Download Length: 410 a.a. Molecular weight: 45668.23 Da Isoelectric Point: 4.4581
>NTDB_id=68341 SNAG_RS02980 WP_096406382.1 546831..548063(+) (clpX) [Streptococcus sp. NPS 308]
MPTNRKNDMIVYCSFCGKSQEEVKKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDVMFEVPSQENVKLVRITKEAVD
GTEKPILETA
MPTNRKNDMIVYCSFCGKSQEEVKKIIAGNNAFICNECVELAQEIIREELAEEVLADLSEVPKPIELLNILNHYVIGQDR
AKRALAVAVYNHYKRINFHDTREESEDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVEN
ILLKLLQAADFNIERAERGIIYVDEIDKIAKKSENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQVDT
KNILFIVGGAFDGIEEIVKQRLGEKVIGFGQNNKAIDENSSYMQEIIAEDIQKFGIIPELIGRLPVFAALEQLTVDDLVR
ILKEPRNALVKQYQTLLSYDDVELEFDDEALQEIANKAIERKTGARGLRSIIEETMLDVMFEVPSQENVKLVRITKEAVD
GTEKPILETA
Nucleotide
Download Length: 1233 bp
>NTDB_id=68341 SNAG_RS02980 WP_096406382.1 546831..548063(+) (clpX) [Streptococcus sp. NPS 308]
ATGCCTACAAATAGGAAAAATGATATGATAGTTTATTGCTCATTTTGTGGCAAAAGCCAAGAAGAAGTAAAGAAAATAAT
CGCTGGGAACAACGCCTTTATCTGTAATGAATGTGTGGAGTTGGCCCAGGAAATTATTCGGGAGGAGTTGGCCGAGGAAG
TTTTGGCAGACTTGTCTGAAGTACCAAAACCAATCGAGCTCCTCAATATCTTAAACCACTATGTGATCGGTCAGGATCGT
GCCAAACGTGCCTTGGCAGTAGCAGTTTACAATCACTATAAACGCATCAATTTCCACGATACGCGAGAAGAGTCTGAAGA
TGTGGATTTGCAGAAGTCAAACATCTTGATGATTGGTCCAACTGGTTCTGGGAAAACTTTCTTGGCTCAGACTTTGGCTA
AGAGCTTGAATGTGCCTTTTGCTATTGCAGATGCGACAGCTCTGACTGAGGCTGGTTATGTGGGTGAGGACGTAGAAAAT
ATCCTCCTCAAACTCTTGCAGGCTGCTGACTTTAACATCGAACGTGCAGAACGTGGGATTATCTACGTAGATGAAATTGA
CAAGATTGCCAAGAAGAGCGAGAACGTGTCTATCACACGTGACGTTTCTGGTGAAGGGGTGCAACAAGCTCTTCTCAAGA
TTATTGAGGGAACTGTAGCCAGTGTACCGCCTCAAGGTGGACGCAAGCATCCGCAACAAGAGATGATTCAGGTAGATACC
AAGAATATCCTCTTCATCGTGGGTGGTGCTTTTGATGGCATCGAAGAAATTGTGAAACAACGTCTGGGAGAAAAAGTCAT
CGGTTTTGGCCAAAATAACAAGGCGATTGACGAAAACAGCTCCTACATGCAAGAAATCATCGCAGAAGACATTCAAAAAT
TCGGTATTATCCCTGAGTTGATTGGACGCTTACCTGTCTTTGCTGCTCTTGAGCAATTGACGGTCGATGACTTGGTTCGC
ATCTTGAAGGAGCCAAGAAATGCCTTGGTCAAACAATACCAAACCTTGCTTTCTTATGATGATGTTGAGTTGGAATTTGA
CGATGAAGCCCTTCAGGAAATCGCCAATAAGGCTATCGAACGCAAGACAGGGGCGCGTGGTCTTCGGTCTATTATCGAAG
AAACCATGCTAGATGTTATGTTTGAAGTGCCAAGTCAGGAAAATGTGAAATTGGTCCGCATCACAAAAGAAGCTGTCGAT
GGAACGGAAAAACCCATCCTAGAAACAGCCTAG
ATGCCTACAAATAGGAAAAATGATATGATAGTTTATTGCTCATTTTGTGGCAAAAGCCAAGAAGAAGTAAAGAAAATAAT
CGCTGGGAACAACGCCTTTATCTGTAATGAATGTGTGGAGTTGGCCCAGGAAATTATTCGGGAGGAGTTGGCCGAGGAAG
TTTTGGCAGACTTGTCTGAAGTACCAAAACCAATCGAGCTCCTCAATATCTTAAACCACTATGTGATCGGTCAGGATCGT
GCCAAACGTGCCTTGGCAGTAGCAGTTTACAATCACTATAAACGCATCAATTTCCACGATACGCGAGAAGAGTCTGAAGA
TGTGGATTTGCAGAAGTCAAACATCTTGATGATTGGTCCAACTGGTTCTGGGAAAACTTTCTTGGCTCAGACTTTGGCTA
AGAGCTTGAATGTGCCTTTTGCTATTGCAGATGCGACAGCTCTGACTGAGGCTGGTTATGTGGGTGAGGACGTAGAAAAT
ATCCTCCTCAAACTCTTGCAGGCTGCTGACTTTAACATCGAACGTGCAGAACGTGGGATTATCTACGTAGATGAAATTGA
CAAGATTGCCAAGAAGAGCGAGAACGTGTCTATCACACGTGACGTTTCTGGTGAAGGGGTGCAACAAGCTCTTCTCAAGA
TTATTGAGGGAACTGTAGCCAGTGTACCGCCTCAAGGTGGACGCAAGCATCCGCAACAAGAGATGATTCAGGTAGATACC
AAGAATATCCTCTTCATCGTGGGTGGTGCTTTTGATGGCATCGAAGAAATTGTGAAACAACGTCTGGGAGAAAAAGTCAT
CGGTTTTGGCCAAAATAACAAGGCGATTGACGAAAACAGCTCCTACATGCAAGAAATCATCGCAGAAGACATTCAAAAAT
TCGGTATTATCCCTGAGTTGATTGGACGCTTACCTGTCTTTGCTGCTCTTGAGCAATTGACGGTCGATGACTTGGTTCGC
ATCTTGAAGGAGCCAAGAAATGCCTTGGTCAAACAATACCAAACCTTGCTTTCTTATGATGATGTTGAGTTGGAATTTGA
CGATGAAGCCCTTCAGGAAATCGCCAATAAGGCTATCGAACGCAAGACAGGGGCGCGTGGTCTTCGGTCTATTATCGAAG
AAACCATGCTAGATGTTATGTTTGAAGTGCCAAGTCAGGAAAATGTGAAATTGGTCCGCATCACAAAAGAAGCTGTCGAT
GGAACGGAAAAACCCATCCTAGAAACAGCCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
87.073 |
100 |
0.871 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
57.463 |
98.049 |
0.563 |